RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 RGS16O15492 202 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 CLTAP09496 248 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 UQCRFS1P1P0C7P4 283 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 KRT13P13646 458 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 TATP17735 454 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 TRPC3Q13507 836 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 HSP90AA4PQ58FG1 418 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 SPATA1Q5VX52 437 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 BICDL1Q6ZP65 573 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 VPS52Q8N1B4 723 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 RETREG2Q8NC44 543 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 SLF1Q9BQI6 1058 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 NBPF3Q9H094 633 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 RTEL1Q9NZ71 1219 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 CTDP1Q9Y5B0 961 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 DUOX2Q9NRD8 1548 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 MSH6P52701 1360 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 NUTM2BA6NNL0 878 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 NUTM2EB1AL46 878 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 EIF3BP55884 814 aaKnown RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 CRYMQ14894 314 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 RRS1Q15050 365 aaKnown RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 SEL1L2Q5TEA6 688 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 TMED8Q6PL24 325 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 VSTM4Q8IW00 320 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 CCDC170Q8IYT3 715 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 MAIP1Q8WWC4 291 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 ARHGEF2Q92974 986 aaKnown RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 GFM2Q969S9 779 aaKnown RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 CEP104O60308 925 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 ATP5HO75947 161 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 GCFC2P16383 781 aaKnown RBP5.57□□□□□ -1.52
PCDH9-203ENST00000456367 KRT2P35908 639 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 DNM2P50570 870 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 STX17P56962 302 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 RPS6KA1Q15418 735 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 TCP11Q8WWU5 503 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 TCEANC2Q96MN5 208 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 RUNDC3BQ96NL0 473 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 ARHGAP31Q2M1Z3 1444 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 ADGRF5Q8IZF2 1346 aa5.57□□□□□ -1.52
PCDH9-203ENST00000456367 PFKFB2O60825 505 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TROVE2P10155 538 aaKnown RBP eCLIP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 FERP16591 822 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 PDE6BP35913 854 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 RWDD2BP57060 319 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ME3Q16798 604 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 SUGP1Q8IWZ8 645 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 NUDT16Q96DE0 195 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ZMAT2Q96NC0 199 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 NOC4LQ9BVI4 516 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 MOV10L1Q9BXT6 1211 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ABCB6Q9NP58 842 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TXLNGQ9NUQ3 528 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 EPN1Q9Y6I3 576 aaPredicted RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CLASP1Q7Z460 1538 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 NCOA3Q9Y6Q9 1424 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 H7C1D1 291 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 RNF113AO15541 343 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TADA3O75528 432 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CD2BP2O95400 341 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 HOXB7P09629 217 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ZNF131P52739 623 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ASIC1P78348 528 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 PLCB4Q15147 1175 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TAF11Q15544 211 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 MYSM1Q5VVJ2 828 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CC2D2BQ6DHV5 1058 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CCDC65Q8IXS2 484 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 AFAP1Q8N556 730 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 HNRNPLLQ8WVV9 542 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 LRP2BPQ9P2M1 347 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 KIF21AQ7Z4S6 1674 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TARSL2A2RTX5 802 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 PI4KAP2A4QPH2 592 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TRIM37O94972 964 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 GNAT2P19087 354 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 IL15P40933 162 aaPredicted RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TRAF1Q13077 416 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 BIRC3Q13489 604 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 METTL24Q5JXM2 366 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CAPRIN2Q6IMN6 1127 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CNNM4Q6P4Q7 775 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 USP37Q86T82 979 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 PI4KAP1Q8N8J0 262 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 LINS1Q8NG48 757 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 RAB3IL1Q8TBN0 382 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 IFIH1Q9BYX4 1025 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 VPS16Q9H269 839 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 PPP1R1BQ9UD71 204 aaPredicted RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 TRIM35Q9UPQ4 493 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 PPIP5K1Q6PFW1 1433 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 SEMA3EO15041 775 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 RPSAP08865 295 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 PFKFB1P16118 471 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 NR1D1P20393 614 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CTNNA2P26232 953 aa5.56□□□□□ -1.52
PCDH9-203ENST00000456367 CCT6AP40227 531 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 ADKP55263 362 aaKnown RBP5.56□□□□□ -1.52
PCDH9-203ENST00000456367 MIER3Q7Z3K6 550 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms