RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 RARSP54136 660 aaKnown RBP23.1■■□□□ 1.29
MSH6-206ENST00000455383 ANKRD13CQ8N6S4 541 aa23.1■■□□□ 1.29
MSH6-206ENST00000455383 COA7Q96BR5 231 aa23.1■■□□□ 1.29
MSH6-206ENST00000455383 TBC1D2Q9BYX2 928 aa23.1■■□□□ 1.29
MSH6-206ENST00000455383 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.1■■□□□ 1.29
MSH6-206ENST00000455383 PNMA3Q9UL41 463 aa23.1■■□□□ 1.29
MSH6-206ENST00000455383 LOC285556D6RIA3 1793 aa23.09■■□□□ 1.29
MSH6-206ENST00000455383 FAM196BA6NMK8 535 aa23.09■■□□□ 1.29
MSH6-206ENST00000455383 LDHCP07864 332 aa23.09■■□□□ 1.29
MSH6-206ENST00000455383 GSTO1P78417 241 aa23.09■■□□□ 1.29
MSH6-206ENST00000455383 RRP1BQ14684 758 aaKnown RBP23.09■■□□□ 1.29
MSH6-206ENST00000455383 SPATA5Q8NB90 893 aa23.09■■□□□ 1.29
MSH6-206ENST00000455383 DEFB118Q96PH6 123 aa23.09■■□□□ 1.29
MSH6-206ENST00000455383 DOCK3Q8IZD9 2030 aa23.09■■□□□ 1.29
MSH6-206ENST00000455383 ARID4AP29374 1257 aaPredicted RBP23.08■■□□□ 1.29
MSH6-206ENST00000455383 CAP2P40123 477 aa23.08■■□□□ 1.29
MSH6-206ENST00000455383 SPP2Q13103 211 aa23.08■■□□□ 1.29
MSH6-206ENST00000455383 PI16Q6UXB8 463 aa23.08■■□□□ 1.29
MSH6-206ENST00000455383 TBC1D9Q6ZT07 1266 aa23.08■■□□□ 1.29
MSH6-206ENST00000455383 ZNF280CQ8ND82 737 aa23.08■■□□□ 1.29
MSH6-206ENST00000455383 TFRCP02786 760 aaKnown RBP23.07■■□□□ 1.28
MSH6-206ENST00000455383 GCLCP48506 637 aaPredicted RBP23.07■■□□□ 1.28
MSH6-206ENST00000455383 SH3D19Q5HYK7 790 aa23.07■■□□□ 1.28
MSH6-206ENST00000455383 NEUROD6Q96NK8 337 aa23.07■■□□□ 1.28
MSH6-206ENST00000455383 A0A1W2PPC1 479 aa23.06■■□□□ 1.28
MSH6-206ENST00000455383 HERC5Q9UII4 1024 aaKnown RBP23.05■■□□□ 1.28
MSH6-206ENST00000455383 GJD2Q9UKL4 321 aa23.05■■□□□ 1.28
MSH6-206ENST00000455383 ATAD5Q96QE3 1844 aa23.04■■□□□ 1.28
MSH6-206ENST00000455383 USP17L5A8MUK1 530 aa23.04■■□□□ 1.28
MSH6-206ENST00000455383 EVI5O60447 810 aa23.04■■□□□ 1.28
MSH6-206ENST00000455383 MCAMP43121 646 aa23.04■■□□□ 1.28
MSH6-206ENST00000455383 HMGCS2P54868 508 aa23.04■■□□□ 1.28
MSH6-206ENST00000455383 PABPC4Q13310 644 aaKnown RBP eCLIP23.04■■□□□ 1.28
MSH6-206ENST00000455383 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.04■■□□□ 1.284e-8■■□□□ 12.3
MSH6-206ENST00000455383 ASCC2Q9H1I8 757 aaPredicted RBP23.04■■□□□ 1.28
MSH6-206ENST00000455383 PAWRQ96IZ0 340 aaKnown RBP23.03■■□□□ 1.28
MSH6-206ENST00000455383 WDR18Q9BV38 432 aa23.03■■□□□ 1.28
MSH6-206ENST00000455383 RAI14Q9P0K7 980 aa23.03■■□□□ 1.28
MSH6-206ENST00000455383 MORF4L1Q9UBU8 362 aa23.03■■□□□ 1.28
MSH6-206ENST00000455383 HMGCRP04035 888 aa23.02■■□□□ 1.28
MSH6-206ENST00000455383 UQCRFS1P1P0C7P4 283 aa23.02■■□□□ 1.28
MSH6-206ENST00000455383 GORABQ5T7V8 394 aa23.02■■□□□ 1.28
MSH6-206ENST00000455383 TEX11Q8IYF3 940 aa23.02■■□□□ 1.28
MSH6-206ENST00000455383 ANKLE1Q8NAG6 615 aa23.02■■□□□ 1.28
MSH6-206ENST00000455383 PI4KBQ9UBF8 816 aa23.02■■□□□ 1.28
MSH6-206ENST00000455383 TAOK2Q9UL54 1235 aa23.02■■□□□ 1.28
MSH6-206ENST00000455383 SIPA1L1O43166 1804 aa23.01■■□□□ 1.27
MSH6-206ENST00000455383 PNMA6EA0A0J9YXQ4 647 aa23.01■■□□□ 1.27
MSH6-206ENST00000455383 GNAI2P04899 355 aa23.01■■□□□ 1.27
MSH6-206ENST00000455383 NECAB2Q7Z6G3 386 aa23.01■■□□□ 1.27
MSH6-206ENST00000455383 METTL16Q86W50 562 aaKnown RBP23.01■■□□□ 1.27
MSH6-206ENST00000455383 SH3RF3Q8TEJ3 882 aaPredicted RBP23.01■■□□□ 1.27
MSH6-206ENST00000455383 DIS3LQ8TF46 1054 aaKnown RBP23.01■■□□□ 1.27
MSH6-206ENST00000455383 DHX36Q9H2U1 1008 aaKnown RBP23.01■■□□□ 1.27
MSH6-206ENST00000455383 AS3MTQ9HBK9 375 aa23.01■■□□□ 1.27
MSH6-206ENST00000455383 ALPK3Q96L96 1907 aa23.01■■□□□ 1.27
MSH6-206ENST00000455383 TRIM27P14373 513 aa23■■□□□ 1.27
MSH6-206ENST00000455383 HOXA7P31268 230 aaPredicted RBP23■■□□□ 1.27
MSH6-206ENST00000455383 PPP4CP60510 307 aa23■■□□□ 1.27
MSH6-206ENST00000455383 LRP2BPQ9P2M1 347 aa23■■□□□ 1.27
MSH6-206ENST00000455383 RPTORQ8N122 1335 aa23■■□□□ 1.27
MSH6-206ENST00000455383 PLXNB2O15031 1838 aa22.99■■□□□ 1.27
MSH6-206ENST00000455383 MNX1P50219 401 aaPredicted RBP22.99■■□□□ 1.27
MSH6-206ENST00000455383 BACE1P56817 501 aa22.99■■□□□ 1.27
MSH6-206ENST00000455383 JAG1P78504 1218 aa22.99■■□□□ 1.27
MSH6-206ENST00000455383 G3BP1Q13283 466 aaKnown RBP eCLIP22.99■■□□□ 1.277e-6■□□□□ 8.9
MSH6-206ENST00000455383 SOX1O00570 391 aaPredicted RBP22.98■■□□□ 1.27
MSH6-206ENST00000455383 TRIM32Q13049 653 aa22.98■■□□□ 1.27
MSH6-206ENST00000455383 DNAJC18Q9H819 358 aa22.98■■□□□ 1.27
MSH6-206ENST00000455383 GPR108Q9NPR9 543 aa22.98■■□□□ 1.27
MSH6-206ENST00000455383 STAP2Q9UGK3 403 aa22.98■■□□□ 1.27
MSH6-206ENST00000455383 TNNQ9UQP3 1299 aa22.98■■□□□ 1.27
MSH6-206ENST00000455383 LAMA3Q16787 3333 aa22.98■■□□□ 1.27
MSH6-206ENST00000455383 IPO8O15397 1037 aaKnown RBP22.97■■□□□ 1.27
MSH6-206ENST00000455383 IGSF3O75054 1194 aa22.97■■□□□ 1.27
MSH6-206ENST00000455383 ASNSP08243 561 aa22.97■■□□□ 1.27
MSH6-206ENST00000455383 MAP3K21Q5TCX8 1036 aa22.97■■□□□ 1.27
MSH6-206ENST00000455383 ATF7IPQ6VMQ6 1270 aa22.97■■□□□ 1.27
MSH6-206ENST00000455383 FOXP4Q8IVH2 680 aaPredicted RBP22.97■■□□□ 1.27
MSH6-206ENST00000455383 TRIB2Q92519 343 aa22.97■■□□□ 1.27
MSH6-206ENST00000455383 GDF15Q99988 308 aa22.97■■□□□ 1.27
MSH6-206ENST00000455383 HMX1Q9NP08 348 aaPredicted RBP22.97■■□□□ 1.27
MSH6-206ENST00000455383 GINM1Q9NU53 330 aa22.97■■□□□ 1.27
MSH6-206ENST00000455383 AATFQ9NY61 560 aaKnown RBP eCLIP22.97■■□□□ 1.27
MSH6-206ENST00000455383 MAST2Q6P0Q8 1798 aa22.96■■□□□ 1.27
MSH6-206ENST00000455383 BAG3O95817 575 aa22.96■■□□□ 1.27
MSH6-206ENST00000455383 PLCG2P16885 1265 aa22.96■■□□□ 1.27
MSH6-206ENST00000455383 BMP8BP34820 402 aa22.96■■□□□ 1.27
MSH6-206ENST00000455383 MTMR2Q13614 643 aa22.96■■□□□ 1.27
MSH6-206ENST00000455383 NAA16Q6N069 864 aaPredicted RBP22.96■■□□□ 1.27
MSH6-206ENST00000455383 P2RX7Q99572 595 aaKnown RBP22.96■■□□□ 1.27
MSH6-206ENST00000455383 NOL10Q9BSC4 688 aaKnown RBP22.96■■□□□ 1.27
MSH6-206ENST00000455383 OGDHLQ9ULD0 1010 aa22.96■■□□□ 1.27
MSH6-206ENST00000455383 C19orf81C9J6K1 198 aa22.95■■□□□ 1.26
MSH6-206ENST00000455383 FLT1P17948 1338 aa22.95■■□□□ 1.26
MSH6-206ENST00000455383 POLA2Q14181 598 aa22.95■■□□□ 1.26
MSH6-206ENST00000455383 ADGRA1Q86SQ6 560 aa22.95■■□□□ 1.26
MSH6-206ENST00000455383 ZNF512BQ96KM6 892 aaPredicted RBP22.95■■□□□ 1.26
MSH6-206ENST00000455383 TXNRD2Q9NNW7 524 aa22.95■■□□□ 1.26
MSH6-206ENST00000455383 SNRKQ9NRH2 765 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms