RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF330Q9Y3S2 320 aaPredicted RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 COL4A4P53420 1690 aaPredicted RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 ENTPD3O75355 529 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 SLURP2P0DP57 97 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 LMNB1P20700 586 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 RPS6KB1P23443 525 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 ADD1P35611 737 aaKnown RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 SF3B2Q13435 895 aaKnown RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 CCDC158Q5M9N0 1113 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 DBNDD1Q9H9R9 158 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 ATP8A2Q9NTI2 1148 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 LTBP2Q14767 1821 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 ITGBL1O95965 494 aaPredicted RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 PCP11498 1178 aaKnown RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 ANP32AP39687 249 aaKnown RBP5.97□□□□□ -1.45
RIF1-207ENST00000454583 TTC39AQ5SRH9 613 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 REPS2Q8NFH8 660 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 TAOK3Q9H2K8 898 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 TANC1Q9C0D5 1861 aa5.97□□□□□ -1.45
RIF1-207ENST00000454583 SLC9C2Q5TAH2 1124 aa5.96□□□□□ -1.45
RIF1-207ENST00000454583 ARMT1Q9H993 441 aa5.96□□□□□ -1.45
RIF1-207ENST00000454583 TNRC18O15417 2968 aaPredicted RBP5.96□□□□□ -1.45
RIF1-207ENST00000454583 CYP2D6P10635 497 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 TROAPQ12815 778 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 PKN1Q16512 942 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 DOK7Q18PE1 504 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 CERS3Q8IU89 383 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 TPCN1Q9ULQ1 816 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 CIZ1Q9ULV3 898 aaPredicted RBP5.96□□□□□ -1.46
RIF1-207ENST00000454583 TESPA1A2RU30 521 aaPredicted RBP5.96□□□□□ -1.46
RIF1-207ENST00000454583 RANBP6O60518 1105 aaKnown RBP5.96□□□□□ -1.46
RIF1-207ENST00000454583 GNAT2P19087 354 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 CWC27Q6UX04 472 aaKnown RBP5.96□□□□□ -1.46
RIF1-207ENST00000454583 EYA3Q99504 573 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 MYOZ2Q9NPC6 264 aa5.96□□□□□ -1.46
RIF1-207ENST00000454583 NSFL1CQ9UNZ2 370 aaKnown RBP5.96□□□□□ -1.46
RIF1-207ENST00000454583 COL4A6Q14031 1691 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 FAM155AB1AL88 458 aaPredicted RBP5.95□□□□□ -1.46
RIF1-207ENST00000454583 OPLAHO14841 1288 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 MBD4O95243 580 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 LIFRP42702 1097 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 BTDP43251 543 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 ZNF70Q9UC06 446 aaPredicted RBP5.95□□□□□ -1.46
RIF1-207ENST00000454583 RALGAPA2Q2PPJ7 1873 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 PLA2G6O60733 806 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 SLC4A3P48751 1232 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 NBPF9Q3BBW0 867 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 MFSD14BQ5SR56 506 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 ZGPATQ8N5A5 531 aaKnown RBP5.95□□□□□ -1.46
RIF1-207ENST00000454583 GLTPD2A6NH11 291 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 POLD1P28340 1107 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 CLK2P49760 499 aaKnown RBP5.95□□□□□ -1.46
RIF1-207ENST00000454583 PPARAQ07869 468 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 CAVIN4Q5BKX8 364 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 LDLRAD1Q5T700 205 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 SDR42E1Q8WUS8 393 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 MAD2L2Q9UI95 211 aa5.95□□□□□ -1.46
RIF1-207ENST00000454583 CYP2D7A0A087X1C5 515 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 KIF3CO14782 793 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 ECM2O94769 699 aaPredicted RBP5.94□□□□□ -1.46
RIF1-207ENST00000454583 GTF2IP78347 998 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 ME3Q16798 604 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 SH3D19Q5HYK7 790 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 BTNL9Q6UXG8 535 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 TMEM87AQ8NBN3 555 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 P2RX7Q99572 595 aaKnown RBP5.94□□□□□ -1.46
RIF1-207ENST00000454583 NOL10Q9BSC4 688 aaKnown RBP5.94□□□□□ -1.46
RIF1-207ENST00000454583 GPHNQ9NQX3 736 aaPredicted RBP5.94□□□□□ -1.46
RIF1-207ENST00000454583 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 ARPP21Q9UBL0 812 aaPredicted RBP5.94□□□□□ -1.46
RIF1-207ENST00000454583 UNCXA6NJT0 531 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 IRF6O14896 467 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 CYTH3O43739 400 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 PFKFB2O60825 505 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 USP17L8P0C7I0 530 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 PLCB2Q00722 1185 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 ECM1Q16610 540 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 KLHL34Q8N239 644 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.94□□□□□ -1.466e-7■■■■□ 23.4
RIF1-207ENST00000454583 FAM151AQ8WW52 585 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 C12orf42Q96LP6 360 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 PPP2R3BQ9Y5P8 575 aa5.94□□□□□ -1.46
RIF1-207ENST00000454583 PALM3A6NDB9 673 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 PPP1R11O60927 126 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 GJA5P36382 358 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 ENAHQ8N8S7 591 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 GMCL1P1Q8NEA9 526 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 STK36Q9NRP7 1315 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 MAGEB6P1A0A0J9YX57 407 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 A0A1W2PRG0 241 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 K7ELQ4 463 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 CDC27P30260 824 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 GMPSP49915 693 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 AK2P54819 239 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 LBX2Q6XYB7 198 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 ERICH6Q7L0X2 663 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 INTS4Q96HW7 963 aaKnown RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 ANKIB1Q9P2G1 1089 aa5.93□□□□□ -1.46
RIF1-207ENST00000454583 FARP1Q9Y4F1 1045 aaPredicted RBP5.93□□□□□ -1.46
RIF1-207ENST00000454583 ZNF536O15090 1300 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms