RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 PDE4AP27815 886 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 USP5P45974 858 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 NOL9Q5SY16 702 aaKnown RBP17.7■□□□□ 0.42
VPS16-205ENST00000453689 OTUD5Q96G74 571 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
VPS16-205ENST00000453689 GLRX3O76003 335 aaKnown RBP17.69■□□□□ 0.42
VPS16-205ENST00000453689 PDE1AP54750 535 aa17.69■□□□□ 0.42
VPS16-205ENST00000453689 ERO1BQ86YB8 467 aa17.69■□□□□ 0.42
VPS16-205ENST00000453689 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
VPS16-205ENST00000453689 KBTBD3Q8NAB2 608 aa17.69■□□□□ 0.42
VPS16-205ENST00000453689 DHX36Q9H2U1 1008 aaKnown RBP17.69■□□□□ 0.42
VPS16-205ENST00000453689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.69■□□□□ 0.42
VPS16-205ENST00000453689 PRDM10Q9NQV6 1147 aa17.69■□□□□ 0.42
VPS16-205ENST00000453689 SAP30BPQ9UHR5 308 aaKnown RBP17.69■□□□□ 0.42
VPS16-205ENST00000453689 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
VPS16-205ENST00000453689 INHBEP58166 350 aa17.68■□□□□ 0.42
VPS16-205ENST00000453689 UBE3CQ15386 1083 aa17.68■□□□□ 0.42
VPS16-205ENST00000453689 COL13A1Q5TAT6 717 aaPredicted RBP17.68■□□□□ 0.42
VPS16-205ENST00000453689 ZSCAN25Q6NSZ9 544 aa17.68■□□□□ 0.42
VPS16-205ENST00000453689 PLEKHM2Q8IWE5 1019 aa17.68■□□□□ 0.42
VPS16-205ENST00000453689 PI4KBQ9UBF8 816 aa17.68■□□□□ 0.42
VPS16-205ENST00000453689 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
VPS16-205ENST00000453689 PPIL2Q13356 520 aa17.67■□□□□ 0.42
VPS16-205ENST00000453689 SLC4A8Q2Y0W8 1093 aa17.67■□□□□ 0.42
VPS16-205ENST00000453689 IFNL1Q8IU54 200 aa17.67■□□□□ 0.42
VPS16-205ENST00000453689 SCYL3Q8IZE3 742 aa17.67■□□□□ 0.42
VPS16-205ENST00000453689 MS4A4AQ96JQ5 239 aa17.67■□□□□ 0.42
VPS16-205ENST00000453689 CRNKL1Q9BZJ0 848 aaKnown RBP17.67■□□□□ 0.42
VPS16-205ENST00000453689 OSBPL3Q9H4L5 887 aa17.67■□□□□ 0.42
VPS16-205ENST00000453689 ARMT1Q9H993 441 aa17.67■□□□□ 0.42
VPS16-205ENST00000453689 HERC5Q9UII4 1024 aaKnown RBP17.67■□□□□ 0.42
VPS16-205ENST00000453689 LOC285556D6RIA3 1793 aa17.66■□□□□ 0.42
VPS16-205ENST00000453689 IGF2BP3O00425 579 aaKnown RBP eCLIP17.66■□□□□ 0.42
VPS16-205ENST00000453689 IRF6O14896 467 aa17.66■□□□□ 0.42
VPS16-205ENST00000453689 MBD4O95243 580 aa17.66■□□□□ 0.42
VPS16-205ENST00000453689 PPATQ06203 517 aa17.66■□□□□ 0.42
VPS16-205ENST00000453689 METTL16Q86W50 562 aaKnown RBP17.66■□□□□ 0.42
VPS16-205ENST00000453689 DNAJC18Q9H819 358 aa17.66■□□□□ 0.42
VPS16-205ENST00000453689 CTNND1O60716 968 aaKnown RBP17.65■□□□□ 0.42
VPS16-205ENST00000453689 HLA-DOAP06340 250 aa17.65■□□□□ 0.42
VPS16-205ENST00000453689 GTF2A2P52657 109 aa17.65■□□□□ 0.42
VPS16-205ENST00000453689 FOXP4Q8IVH2 680 aaPredicted RBP17.65■□□□□ 0.42
VPS16-205ENST00000453689 SDR42E1Q8WUS8 393 aa17.65■□□□□ 0.42
VPS16-205ENST00000453689 PTPN18Q99952 460 aa17.65■□□□□ 0.42
VPS16-205ENST00000453689 PUS7LQ9H0K6 701 aaKnown RBP17.65■□□□□ 0.42
VPS16-205ENST00000453689 PICK1Q9NRD5 415 aa17.65■□□□□ 0.42
VPS16-205ENST00000453689 RNF113AO15541 343 aaKnown RBP17.64■□□□□ 0.41
VPS16-205ENST00000453689 TBC1D8O95759 1140 aa17.64■□□□□ 0.41
VPS16-205ENST00000453689 PTPRAP18433 802 aa17.64■□□□□ 0.41
VPS16-205ENST00000453689 RRP1BQ14684 758 aaKnown RBP17.64■□□□□ 0.41
VPS16-205ENST00000453689 CRACR2BQ8N4Y2 399 aaPredicted RBP17.64■□□□□ 0.41
VPS16-205ENST00000453689 BRI3BPQ8WY22 251 aa17.64■□□□□ 0.41
VPS16-205ENST00000453689 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.64■□□□□ 0.41
VPS16-205ENST00000453689 CCL15-CCL14A0A0B4J2E2 113 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 PRKAB2O43741 272 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 ALDH1A1P00352 501 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 ZFYP08048 801 aaPredicted RBP17.63■□□□□ 0.41
VPS16-205ENST00000453689 CAP2P40123 477 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 SNAPC2Q13487 334 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 CCL15Q16663 113 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 APPBP2Q92624 585 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 FSD1Q9BTV5 496 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 CFHR5Q9BXR6 569 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 TRIM34Q9BYJ4 488 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 DCP1AQ9NPI6 582 aaPredicted RBP17.63■□□□□ 0.41
VPS16-205ENST00000453689 KCNH4Q9UQ05 1017 aa17.63■□□□□ 0.41
VPS16-205ENST00000453689 CETPP11597 493 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 PLCD1P51178 756 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 OTUD7BQ6GQQ9 843 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 TTC6Q86TZ1 520 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 OSBP2Q969R2 916 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 EHD4Q9H223 541 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 ZHX2Q9Y6X8 837 aa17.62■□□□□ 0.41
VPS16-205ENST00000453689 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
VPS16-205ENST00000453689 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
VPS16-205ENST00000453689 CCDC84Q86UT8 332 aaPredicted RBP17.61■□□□□ 0.41
VPS16-205ENST00000453689 R3HDMLQ9H3Y0 253 aa17.61■□□□□ 0.41
VPS16-205ENST00000453689 ATP8A2Q9NTI2 1148 aa17.61■□□□□ 0.41
VPS16-205ENST00000453689 MCM9Q9NXL9 1143 aa17.61■□□□□ 0.41
VPS16-205ENST00000453689 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
VPS16-205ENST00000453689 AFG3L2Q9Y4W6 797 aa17.61■□□□□ 0.41
VPS16-205ENST00000453689 SLC4A4Q9Y6R1 1079 aa17.61■□□□□ 0.41
VPS16-205ENST00000453689 MGAMO43451 1857 aa17.61■□□□□ 0.41
VPS16-205ENST00000453689 M0R2C6 588 aa17.6■□□□□ 0.41
VPS16-205ENST00000453689 EVX2Q03828 476 aa17.6■□□□□ 0.41
VPS16-205ENST00000453689 TTC22Q5TAA0 569 aa17.6■□□□□ 0.41
VPS16-205ENST00000453689 FAM43AQ8N2R8 423 aa17.6■□□□□ 0.41
VPS16-205ENST00000453689 STRBPQ96SI9 672 aaKnown RBP17.6■□□□□ 0.41
VPS16-205ENST00000453689 ZSWIM8A7E2V4 1837 aa17.6■□□□□ 0.41
VPS16-205ENST00000453689 BTBD19C9JJ37 291 aa17.59■□□□□ 0.41
VPS16-205ENST00000453689 CXCL11O14625 94 aa17.59■□□□□ 0.41
VPS16-205ENST00000453689 CYP2D6P10635 497 aa17.59■□□□□ 0.41
VPS16-205ENST00000453689 JAG1P78504 1218 aa17.59■□□□□ 0.41
VPS16-205ENST00000453689 EVI5LQ96CN4 794 aa17.59■□□□□ 0.41
VPS16-205ENST00000453689 GPR25O00155 361 aa17.58■□□□□ 0.4
VPS16-205ENST00000453689 GPAA1O43292 621 aa17.58■□□□□ 0.4
VPS16-205ENST00000453689 GDF11O95390 407 aa17.58■□□□□ 0.4
VPS16-205ENST00000453689 GSPT1P15170 499 aaKnown RBP17.58■□□□□ 0.4
VPS16-205ENST00000453689 GABPAQ06546 454 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms