RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 NCOA7Q8NI08 942 aa23.15■■□□□ 1.3
HIGD1A-204ENST00000452906 CCDC102AQ96A19 550 aa23.15■■□□□ 1.3
HIGD1A-204ENST00000452906 FAM163AQ96GL9 167 aaPredicted RBP23.15■■□□□ 1.3
HIGD1A-204ENST00000452906 RNF41Q9H4P4 317 aaPredicted RBP23.15■■□□□ 1.3
HIGD1A-204ENST00000452906 CNNM2Q9H8M5 875 aa23.15■■□□□ 1.3
HIGD1A-204ENST00000452906 CWC22Q9HCG8 908 aaKnown RBP23.15■■□□□ 1.3
HIGD1A-204ENST00000452906 PPP4CP60510 307 aa23.14■■□□□ 1.29
HIGD1A-204ENST00000452906 CHMP4CQ96CF2 233 aa23.14■■□□□ 1.29
HIGD1A-204ENST00000452906 INTS4Q96HW7 963 aaKnown RBP23.14■■□□□ 1.29
HIGD1A-204ENST00000452906 TMX3Q96JJ7 454 aa23.14■■□□□ 1.29
HIGD1A-204ENST00000452906 JAG2Q9Y219 1238 aa23.14■■□□□ 1.29
HIGD1A-204ENST00000452906 NAV1Q8NEY1 1877 aa23.13■■□□□ 1.29
HIGD1A-204ENST00000452906 PCP11498 1178 aaKnown RBP23.13■■□□□ 1.29
HIGD1A-204ENST00000452906 NT5C2P49902 561 aa23.13■■□□□ 1.29
HIGD1A-204ENST00000452906 FGD1P98174 961 aa23.13■■□□□ 1.29
HIGD1A-204ENST00000452906 ZNF384Q8TF68 577 aa23.13■■□□□ 1.29
HIGD1A-204ENST00000452906 CUL4AQ13619 759 aa23.12■■□□□ 1.29
HIGD1A-204ENST00000452906 AMOTL1Q8IY63 956 aa23.12■■□□□ 1.29
HIGD1A-204ENST00000452906 MXD3Q9BW11 206 aa23.12■■□□□ 1.29
HIGD1A-204ENST00000452906 EPB41L4AQ9HCS5 686 aaPredicted RBP23.12■■□□□ 1.29
HIGD1A-204ENST00000452906 AATFQ9NY61 560 aaKnown RBP eCLIP23.12■■□□□ 1.29
HIGD1A-204ENST00000452906 CHMP5Q9NZZ3 219 aa23.12■■□□□ 1.29
HIGD1A-204ENST00000452906 CASP8AP2Q9UKL3 1982 aa23.12■■□□□ 1.29
HIGD1A-204ENST00000452906 GAKO14976 1311 aa23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 FOCADQ5VW36 1801 aa23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 FAM155AB1AL88 458 aaPredicted RBP23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 MCM5P33992 734 aa23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 KRT23Q9C075 422 aa23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 ARPP21Q9UBL0 812 aaPredicted RBP23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 ANAPC4Q9UJX5 808 aa23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 BAZ2AQ9UIF9 1905 aaKnown RBP23.11■■□□□ 1.29
HIGD1A-204ENST00000452906 GPR75-ASB3A0A0A6YYF3 556 aa23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 WNT10BO00744 389 aa23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 SLC3A2P08195 630 aaKnown RBP23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 ZNF157P51786 506 aaPredicted RBP23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 HAND2P61296 217 aa23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 NBPF9Q3BBW0 867 aa23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 STOX1Q6ZVD7 989 aa23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 FBXL16Q8N461 479 aa23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 SLKQ9H2G2 1235 aaPredicted RBP23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 CDK5RAP2Q96SN8 1893 aa23.1■■□□□ 1.29
HIGD1A-204ENST00000452906 DYNLL1P63167 89 aaKnown RBP23.09■■□□□ 1.29
HIGD1A-204ENST00000452906 HDLBPQ00341 1268 aaKnown RBP23.09■■□□□ 1.29
HIGD1A-204ENST00000452906 KIAA0825Q8IV33 1275 aa23.09■■□□□ 1.29
HIGD1A-204ENST00000452906 MRIQ9BWK5 157 aa23.09■■□□□ 1.29
HIGD1A-204ENST00000452906 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.09■■□□□ 1.29
HIGD1A-204ENST00000452906 TAF6LQ9Y6J9 622 aa23.09■■□□□ 1.29
HIGD1A-204ENST00000452906 PRKAB2O43741 272 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 SLC10A3P09131 477 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 CPA1P15085 419 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 USP5P45974 858 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 SBK1Q52WX2 424 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 AKNAD1Q5T1N1 836 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 HHIPL2Q6UWX4 724 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 MFSD6Q6ZSS7 791 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 STAG1Q8WVM7 1258 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 MTA3Q9BTC8 594 aa23.08■■□□□ 1.29
HIGD1A-204ENST00000452906 BTDP43251 543 aa23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 EXOSC10Q01780 885 aaKnown RBP23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 PPARAQ07869 468 aa23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 DIXDC1Q155Q3 683 aa23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 APOBEC3FQ8IUX4 373 aaKnown RBP23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 SDR42E1Q8WUS8 393 aa23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 TEKT1Q969V4 418 aa23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 TTF2Q9UNY4 1162 aaKnown RBP23.07■■□□□ 1.28
HIGD1A-204ENST00000452906 NF2P35240 595 aa23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 Q6ZUG5 572 aa23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 NOL8Q76FK4 1167 aaKnown RBP23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 MB21D2Q8IYB1 491 aaPredicted RBP23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 REM2Q8IYK8 340 aaPredicted RBP23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 SPRYD3Q8NCJ5 442 aa23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 ZBED3Q96IU2 234 aaPredicted RBP23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 ZIC5Q96T25 663 aa23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 AGXT2Q9BYV1 514 aa23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 DCP1AQ9NPI6 582 aaPredicted RBP23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 SAGE1Q9NXZ1 904 aa23.06■■□□□ 1.28
HIGD1A-204ENST00000452906 TBC1D10CQ8IV04 446 aa23.05■■□□□ 1.28
HIGD1A-204ENST00000452906 MTMR14Q8NCE2 650 aa23.05■■□□□ 1.28
HIGD1A-204ENST00000452906 TMEM87BQ96K49 555 aa23.05■■□□□ 1.28
HIGD1A-204ENST00000452906 TSKSQ9UJT2 592 aa23.05■■□□□ 1.28
HIGD1A-204ENST00000452906 PRC1O43663 620 aa23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 KIF23Q02241 960 aaPredicted RBP23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 TOB2Q14106 344 aaPredicted RBP23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 SART3Q15020 963 aaKnown RBP23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 DLGAP5Q15398 846 aa23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 GRIK5Q16478 980 aa23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 CERS5Q8N5B7 392 aa23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 DAGLAQ9Y4D2 1042 aa23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 DDX60LQ5H9U9 1706 aaKnown RBP23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 MYH1P12882 1939 aa23.04■■□□□ 1.28
HIGD1A-204ENST00000452906 MINDY4BA8MYZ0 360 aa23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 MYO1BO43795 1136 aa23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 PDIA4P13667 645 aaKnown RBP23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 DDIT3P35638 169 aa23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 NUCB2P80303 420 aa23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 RASAL3Q86YV0 1011 aa23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 TEX11Q8IYF3 940 aa23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 SH3RF3Q8TEJ3 882 aaPredicted RBP23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 NBPF3Q9H094 633 aa23.03■■□□□ 1.28
HIGD1A-204ENST00000452906 ZNF287Q9HBT7 754 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms