RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 SCYL3Q8IZE3 742 aa14.49□□□□□ -0.09
SMPD4-212ENST00000451542 OTUD7AQ8TE49 926 aaPredicted RBP14.49□□□□□ -0.09
SMPD4-212ENST00000451542 ZIC5Q96T25 663 aa14.49□□□□□ -0.09
SMPD4-212ENST00000451542 ATP8A2Q9NTI2 1148 aa14.49□□□□□ -0.09
SMPD4-212ENST00000451542 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
SMPD4-212ENST00000451542 PALD1Q9ULE6 856 aa14.49□□□□□ -0.09
SMPD4-212ENST00000451542 SNCAIPQ9Y6H5 919 aa14.49□□□□□ -0.09
SMPD4-212ENST00000451542 OTOFQ9HC10 1997 aa14.49□□□□□ -0.09
SMPD4-212ENST00000451542 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 CETPP11597 493 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 GNAT2P19087 354 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 PPIL2Q13356 520 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 SNAPC2Q13487 334 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 TBC1D2Q9BYX2 928 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 ARMT1Q9H993 441 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 PRDM10Q9NQV6 1147 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 GINM1Q9NU53 330 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 MCM9Q9NXL9 1143 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 SAP30BPQ9UHR5 308 aaKnown RBP14.48□□□□□ -0.09
SMPD4-212ENST00000451542 SERPINB13Q9UIV8 391 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 MYH1P12882 1939 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 CDK5RAP2Q96SN8 1893 aa14.48□□□□□ -0.09
SMPD4-212ENST00000451542 SALL3Q9BXA9 1300 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 TRIM6-TRIM34B2RNG4 842 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 TRPA1O75762 1119 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 LCORLQ8N3X6 602 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 EHD4Q9H223 541 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 AS3MTQ9HBK9 375 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 RNF186Q9NXI6 227 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 SLC4A4Q9Y6R1 1079 aa14.47□□□□□ -0.09
SMPD4-212ENST00000451542 CCL15-CCL14A0A0B4J2E2 113 aa14.46□□□□□ -0.09
SMPD4-212ENST00000451542 PHF20L1A8MW92 1017 aa14.46□□□□□ -0.09
SMPD4-212ENST00000451542 ASNSP08243 561 aa14.46□□□□□ -0.09
SMPD4-212ENST00000451542 CAP2P40123 477 aa14.46□□□□□ -0.09
SMPD4-212ENST00000451542 LBX1P52954 281 aa14.46□□□□□ -0.09
SMPD4-212ENST00000451542 CCL15Q16663 113 aa14.46□□□□□ -0.09
SMPD4-212ENST00000451542 OSBPL3Q9H4L5 887 aa14.46□□□□□ -0.09
SMPD4-212ENST00000451542 CEP350Q5VT06 3117 aa14.45□□□□□ -0.1
SMPD4-212ENST00000451542 TESPA1A2RU30 521 aaPredicted RBP14.45□□□□□ -0.1
SMPD4-212ENST00000451542 CXCL11O14625 94 aa14.45□□□□□ -0.1
SMPD4-212ENST00000451542 HSPA8P11142 646 aaKnown RBP14.45□□□□□ -0.1
SMPD4-212ENST00000451542 IFNL1Q8IU54 200 aa14.45□□□□□ -0.1
SMPD4-212ENST00000451542 PLEKHM2Q8IWE5 1019 aa14.45□□□□□ -0.1
SMPD4-212ENST00000451542 SDR42E1Q8WUS8 393 aa14.45□□□□□ -0.1
SMPD4-212ENST00000451542 NACAP1Q9BZK3 213 aa14.45□□□□□ -0.1
SMPD4-212ENST00000451542 PUS7LQ9H0K6 701 aaKnown RBP14.45□□□□□ -0.1
SMPD4-212ENST00000451542 DCP1AQ9NPI6 582 aaPredicted RBP14.45□□□□□ -0.1
SMPD4-212ENST00000451542 ZHX2Q9Y6X8 837 aa14.45□□□□□ -0.1
SMPD4-212ENST00000451542 IRF6O14896 467 aa14.44□□□□□ -0.1
SMPD4-212ENST00000451542 PTPRAP18433 802 aa14.44□□□□□ -0.1
SMPD4-212ENST00000451542 GIMAP6Q6P9H5 292 aa14.44□□□□□ -0.1
SMPD4-212ENST00000451542 FASTKD5Q7L8L6 764 aaKnown RBP14.44□□□□□ -0.1
SMPD4-212ENST00000451542 METTL16Q86W50 562 aaKnown RBP14.44□□□□□ -0.1
SMPD4-212ENST00000451542 RILPL2Q969X0 211 aa14.44□□□□□ -0.1
SMPD4-212ENST00000451542 ZCCHC17Q9NP64 241 aaKnown RBP14.44□□□□□ -0.1
SMPD4-212ENST00000451542 CABP5Q9NP86 173 aa14.44□□□□□ -0.1
SMPD4-212ENST00000451542 ARPP21Q9UBL0 812 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-212ENST00000451542 SWAP70Q9UH65 585 aa14.44□□□□□ -0.1
SMPD4-212ENST00000451542 NAV1Q8NEY1 1877 aa14.44□□□□□ -0.1
SMPD4-212ENST00000451542 FAM196BA6NMK8 535 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 USP17L5A8MUK1 530 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 HIP1O00291 1037 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 GPAA1O43292 621 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 APPP05067 770 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 GJA5P36382 358 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 SLC4A8Q2Y0W8 1093 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 MS4A4AQ96JQ5 239 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 STRBPQ96SI9 672 aaKnown RBP14.43□□□□□ -0.1
SMPD4-212ENST00000451542 KCNH4Q9UQ05 1017 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 DOCK1Q14185 1865 aa14.43□□□□□ -0.1
SMPD4-212ENST00000451542 PRKAB2O43741 272 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 MFAP1P55081 439 aaKnown RBP14.42□□□□□ -0.1
SMPD4-212ENST00000451542 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 CERKLQ49MI3 558 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-212ENST00000451542 NOM1Q5C9Z4 860 aaKnown RBP14.42□□□□□ -0.1
SMPD4-212ENST00000451542 ZMYM1Q5SVZ6 1142 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
SMPD4-212ENST00000451542 OSBP2Q969R2 916 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 CFHR5Q9BXR6 569 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 ZNF287Q9HBT7 754 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 ZFYVE28Q9HCC9 887 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 HELLSQ9NRZ9 838 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 TSKSQ9UJT2 592 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 LAMB1P07942 1786 aa14.42□□□□□ -0.1
SMPD4-212ENST00000451542 USP17L12C9JPN9 530 aa14.41□□□□□ -0.1
SMPD4-212ENST00000451542 USP17L21D6R901 530 aa14.41□□□□□ -0.1
SMPD4-212ENST00000451542 SLC3A2P08195 630 aaKnown RBP14.41□□□□□ -0.1
SMPD4-212ENST00000451542 TDO2P48775 406 aa14.41□□□□□ -0.1
SMPD4-212ENST00000451542 PLCD1P51178 756 aa14.41□□□□□ -0.1
SMPD4-212ENST00000451542 TAF1CQ15572 869 aaPredicted RBP14.41□□□□□ -0.1
SMPD4-212ENST00000451542 ZNF280CQ8ND82 737 aa14.41□□□□□ -0.1
SMPD4-212ENST00000451542 BRI3BPQ8WY22 251 aa14.41□□□□□ -0.1
SMPD4-212ENST00000451542 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
SMPD4-212ENST00000451542 IGF2BP3O00425 579 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMPD4-212ENST00000451542 TBC1D8O95759 1140 aa14.4□□□□□ -0.1
SMPD4-212ENST00000451542 CHGBP05060 677 aa14.4□□□□□ -0.1
SMPD4-212ENST00000451542 SPP2Q13103 211 aa14.4□□□□□ -0.1
SMPD4-212ENST00000451542 PABPC4Q13310 644 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMPD4-212ENST00000451542 ARHGEF6Q15052 776 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms