RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 ESYT1Q9BSJ8 1104 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 YIPF4Q9BSR8 244 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 SPON2Q9BUD6 331 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 ZCCHC17Q9NP64 241 aaKnown RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 NLRC4Q9NPP4 1024 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 ATP6V0A2Q9Y487 856 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 SNX5Q9Y5X3 404 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 SERTM1A2A2V5 107 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 IRS4O14654 1257 aaPredicted RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 NBPF7P0C2Y1 421 aaPredicted RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 HOXD12P35452 270 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 GABREP78334 506 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 RSRC2Q7L4I2 434 aaKnown RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 DAAM2Q86T65 1068 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 ZMAT2Q96NC0 199 aaKnown RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 FAM210AQ96ND0 272 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 EIF2AK1Q9BQI3 630 aaKnown RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 ATP8A2Q9NTI2 1148 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 ANKEF1Q9NU02 776 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 TMEM94Q12767 1356 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 DDX11L8A8MPP1 907 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 FAM25EA8MYX2 175 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 FAM155AB1AL88 458 aaPredicted RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 CCDC159P0C7I6 412 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 POTEIP0CG38 1075 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 PRKAR2AP13861 404 aaKnown RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 ZSCAN20P17040 1043 aaPredicted RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 COBLL1Q53SF7 1204 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 SPATC1Q76KD6 591 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 SLAIN1Q8ND83 568 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 ZNF669Q96BR6 464 aaPredicted RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 CDK5RAP3Q96JB5 506 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 NAA15Q9BXJ9 866 aaKnown RBP4.66□□□□□ -1.66
UBR3-206ENST00000444475 TBC1D22BQ9NU19 505 aa4.66□□□□□ -1.66
UBR3-206ENST00000444475 CENPJQ9HC77 1338 aaPredicted RBP4.65□□□□□ -1.66
UBR3-206ENST00000444475 GPR39O43194 453 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 UBASH3AP57075 661 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 SATB1Q01826 763 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 PABPC4Q13310 644 aaKnown RBP eCLIP4.65□□□□□ -1.66
UBR3-206ENST00000444475 TCIRG1Q13488 830 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 C21orf62-AS1Q17RA5 79 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 ATP13A4Q4VNC1 1196 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 MCM10Q7L590 875 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 C7orf61Q8IZ16 206 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 FAM43AQ8N2R8 423 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 TMC1Q8TDI8 760 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 RSAD2Q8WXG1 361 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 CEP95Q96GE4 821 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 ISCA1Q9BUE6 129 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 ATP6V0A4Q9HBG4 840 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 ATG3Q9NT62 314 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 CEP72Q9P209 647 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 STK26Q9P289 416 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 PTPN22Q9Y2R2 807 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 HCN4Q9Y3Q4 1203 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 MAGED1Q9Y5V3 778 aaPredicted RBP4.65□□□□□ -1.66
UBR3-206ENST00000444475 LAMC3Q9Y6N6 1575 aa4.65□□□□□ -1.66
UBR3-206ENST00000444475 SMTNL1A8MU46 457 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 SKILP12757 684 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 COL9A1P20849 921 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 GCGRP47871 477 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 TNNI3KQ59H18 835 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 ARMC4Q5T2S8 1044 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 AGAP9Q5VTM2 703 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 SLC6A19Q695T7 634 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 CBARPQ8N350 705 aaPredicted RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 MRPL9Q9BYD2 267 aaKnown RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 KDM2BQ8NHM5 1336 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 FZD9O00144 591 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 FOXO3O43524 673 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 TLR5O60602 858 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 SKAP2O75563 359 aaPredicted RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 HSD17B7P56937 341 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 GTF2IP78347 998 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 CCT2P78371 535 aaKnown RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 CBX2Q14781 532 aaPredicted RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 SHROOM1Q2M3G4 852 aaPredicted RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 EPM2AIP1Q7L775 607 aaPredicted RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 SLC39A7Q92504 469 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 RBM33Q96EV2 1170 aaKnown RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 NT5C1AQ9BXI3 368 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 DBNDD1Q9H9R9 158 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 ZMYM5Q9UJ78 669 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 LRRFIP2Q9Y608 721 aaKnown RBP4.65□□□□□ -1.67
UBR3-206ENST00000444475 ARHGEF11O15085 1522 aa4.65□□□□□ -1.67
UBR3-206ENST00000444475 H0Y3Z8 333 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 CD4P01730 458 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 KIF5BP33176 963 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 GRM3Q14832 879 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 PTPN14Q15678 1187 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 TMEM67Q5HYA8 995 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 CATSPER4Q7RTX7 472 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 TPH2Q8IWU9 490 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 TSEN2Q8NCE0 465 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 ADAMTS18Q8TE60 1221 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 AFAP1L1Q8TED9 768 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 PTCD2Q8WV60 388 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 POF1BQ8WVV4 589 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 HAUS7Q99871 368 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 RSRP1Q9BUV0 290 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms