RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CERS3Q8IU89 383 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
PTPRE-203ENST00000442830 COA7Q96BR5 231 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 GINM1Q9NU53 330 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 TRIM75PA6NK02 468 aa16.95■□□□□ 0.3
PTPRE-203ENST00000442830 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
PTPRE-203ENST00000442830 CCL5P13501 91 aa16.95■□□□□ 0.3
PTPRE-203ENST00000442830 ZKSCAN2Q63HK3 967 aa16.95■□□□□ 0.3
PTPRE-203ENST00000442830 TMED8Q6PL24 325 aaPredicted RBP16.95■□□□□ 0.3
PTPRE-203ENST00000442830 TEX11Q8IYF3 940 aa16.95■□□□□ 0.3
PTPRE-203ENST00000442830 RNF208Q9H0X6 261 aa16.95■□□□□ 0.3
PTPRE-203ENST00000442830 PI4KBQ9UBF8 816 aa16.95■□□□□ 0.3
PTPRE-203ENST00000442830 ADCY3O60266 1144 aa16.94■□□□□ 0.3
PTPRE-203ENST00000442830 MYCP01106 439 aaPredicted RBP16.94■□□□□ 0.3
PTPRE-203ENST00000442830 OS9Q13438 667 aaPredicted RBP16.94■□□□□ 0.3
PTPRE-203ENST00000442830 MTFR1Q15390 333 aa16.94■□□□□ 0.3
PTPRE-203ENST00000442830 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
PTPRE-203ENST00000442830 ZNF280CQ8ND82 737 aa16.94■□□□□ 0.3
PTPRE-203ENST00000442830 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
PTPRE-203ENST00000442830 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
PTPRE-203ENST00000442830 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
PTPRE-203ENST00000442830 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
PTPRE-203ENST00000442830 USP17L5A8MUK1 530 aa16.93■□□□□ 0.3
PTPRE-203ENST00000442830 CAP2P40123 477 aa16.93■□□□□ 0.3
PTPRE-203ENST00000442830 MCAMP43121 646 aa16.93■□□□□ 0.3
PTPRE-203ENST00000442830 NAA16Q6N069 864 aaPredicted RBP16.93■□□□□ 0.3
PTPRE-203ENST00000442830 ZNF384Q8TF68 577 aa16.93■□□□□ 0.3
PTPRE-203ENST00000442830 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
PTPRE-203ENST00000442830 ASNSP08243 561 aa16.92■□□□□ 0.3
PTPRE-203ENST00000442830 FLT3LGP49771 235 aa16.92■□□□□ 0.3
PTPRE-203ENST00000442830 POLA2Q14181 598 aa16.92■□□□□ 0.3
PTPRE-203ENST00000442830 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
PTPRE-203ENST00000442830 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
PTPRE-203ENST00000442830 TRIM34Q9BYJ4 488 aa16.92■□□□□ 0.3
PTPRE-203ENST00000442830 NR2E3Q9Y5X4 410 aa16.92■□□□□ 0.3
PTPRE-203ENST00000442830 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
PTPRE-203ENST00000442830 BCAR3O75815 825 aa16.91■□□□□ 0.3
PTPRE-203ENST00000442830 PPP4CP60510 307 aa16.91■□□□□ 0.3
PTPRE-203ENST00000442830 SPP2Q13103 211 aa16.91■□□□□ 0.3
PTPRE-203ENST00000442830 SH3D19Q5HYK7 790 aa16.91■□□□□ 0.3
PTPRE-203ENST00000442830 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
PTPRE-203ENST00000442830 U2AF1L4Q8WU68 220 aaKnown RBP16.91■□□□□ 0.3
PTPRE-203ENST00000442830 DPF3Q92784 378 aa16.91■□□□□ 0.3
PTPRE-203ENST00000442830 CLUAP1Q96AJ1 413 aa16.91■□□□□ 0.3
PTPRE-203ENST00000442830 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
PTPRE-203ENST00000442830 FARP2O94887 1054 aaPredicted RBP16.9■□□□□ 0.3
PTPRE-203ENST00000442830 SGPL1O95470 568 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 ATP8B2P98198 1209 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 PI16Q6UXB8 463 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 UBE2Q1Q7Z7E8 422 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 FOXP4Q8IVH2 680 aaPredicted RBP16.9■□□□□ 0.3
PTPRE-203ENST00000442830 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 GTF3C2Q8WUA4 911 aaPredicted RBP16.9■□□□□ 0.3
PTPRE-203ENST00000442830 WDR18Q9BV38 432 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 TMOD4Q9NZQ9 345 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 GABRQQ9UN88 632 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 TRIOBPQ9H2D6 2365 aa16.9■□□□□ 0.3
PTPRE-203ENST00000442830 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
PTPRE-203ENST00000442830 H0YGN5 161 aa16.89■□□□□ 0.29
PTPRE-203ENST00000442830 INHAP05111 366 aa16.89■□□□□ 0.29
PTPRE-203ENST00000442830 HLA-DOAP06340 250 aa16.89■□□□□ 0.29
PTPRE-203ENST00000442830 FXR1P51114 621 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTPRE-203ENST00000442830 TMEM57Q8N5G2 664 aa16.89■□□□□ 0.29
PTPRE-203ENST00000442830 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.29
PTPRE-203ENST00000442830 COLQQ9Y215 455 aaPredicted RBP16.89■□□□□ 0.29
PTPRE-203ENST00000442830 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
PTPRE-203ENST00000442830 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
PTPRE-203ENST00000442830 MYH1P12882 1939 aa16.88■□□□□ 0.29
PTPRE-203ENST00000442830 SURF6O75683 361 aaKnown RBP16.88■□□□□ 0.29
PTPRE-203ENST00000442830 HMGCS2P54868 508 aa16.88■□□□□ 0.29
PTPRE-203ENST00000442830 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
PTPRE-203ENST00000442830 TREML2Q5T2D2 321 aa16.88■□□□□ 0.29
PTPRE-203ENST00000442830 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
PTPRE-203ENST00000442830 CRACR2BQ8N4Y2 399 aaPredicted RBP16.88■□□□□ 0.29
PTPRE-203ENST00000442830 UNC93B1Q9H1C4 597 aa16.88■□□□□ 0.29
PTPRE-203ENST00000442830 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTPRE-203ENST00000442830 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.88■□□□□ 0.29
PTPRE-203ENST00000442830 MYO5AQ9Y4I1 1855 aaKnown RBP16.88■□□□□ 0.29
PTPRE-203ENST00000442830 HMGCRP04035 888 aa16.87■□□□□ 0.29
PTPRE-203ENST00000442830 HOXA7P31268 230 aaPredicted RBP16.87■□□□□ 0.29
PTPRE-203ENST00000442830 BACE1P56817 501 aa16.87■□□□□ 0.29
PTPRE-203ENST00000442830 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
PTPRE-203ENST00000442830 ANKLE1Q8NAG6 615 aa16.87■□□□□ 0.29
PTPRE-203ENST00000442830 DBNDD2Q9BQY9 259 aa16.87■□□□□ 0.29
PTPRE-203ENST00000442830 ASCC2Q9H1I8 757 aaPredicted RBP16.87■□□□□ 0.29
PTPRE-203ENST00000442830 PAK6Q9NQU5 681 aaPredicted RBP16.87■□□□□ 0.29
PTPRE-203ENST00000442830 MORF4L1Q9UBU8 362 aa16.87■□□□□ 0.29
PTPRE-203ENST00000442830 FLT1P17948 1338 aa16.87■□□□□ 0.29
PTPRE-203ENST00000442830 FAM196BA6NMK8 535 aa16.86■□□□□ 0.29
PTPRE-203ENST00000442830 TFRCP02786 760 aaKnown RBP16.86■□□□□ 0.29
PTPRE-203ENST00000442830 ITPRIPQ8IWB1 547 aa16.86■□□□□ 0.29
PTPRE-203ENST00000442830 TRMT44Q8IYL2 757 aaKnown RBP16.86■□□□□ 0.29
PTPRE-203ENST00000442830 TGFBRAP1Q8WUH2 860 aa16.86■□□□□ 0.29
PTPRE-203ENST00000442830 SOCS4Q8WXH5 440 aa16.86■□□□□ 0.29
PTPRE-203ENST00000442830 A0A1W2PPC1 479 aa16.85■□□□□ 0.29
PTPRE-203ENST00000442830 USP17L10C9JJH3 530 aa16.85■□□□□ 0.29
PTPRE-203ENST00000442830 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-203ENST00000442830 ELNP15502 786 aa16.85■□□□□ 0.29
PTPRE-203ENST00000442830 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms