RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ECEL1O95672 775 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 EXOSC10Q01780 885 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 PABPC4Q13310 644 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 PWP2Q15269 919 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 PCSK7Q16549 785 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 FOXB2Q5VYV0 432 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 MICALL1Q8N3F8 863 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 UBR7Q8N806 425 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 CHAC2Q8WUX2 184 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 ATG4CQ96DT6 458 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 CEP89Q96ST8 783 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 SMG9Q9H0W8 520 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 GMIPQ9P107 970 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 SLC12A7Q9Y666 1083 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 PLEKHD1A6NEE1 506 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 SLC22A31A6NKX4 558 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 TPD52L2O43399 206 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 PDE8AO60658 829 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 NCAPHQ15003 741 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 LONRF2Q1L5Z9 754 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 KIAA1211LQ6NV74 962 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 LRFN4Q6PJG9 635 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 DDX42Q86XP3 938 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 CCDC155Q8N6L0 562 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 KLHL6Q8WZ60 621 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 IRF7Q92985 503 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 ACSBG1Q96GR2 724 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 SLC9A7Q96T83 725 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 PHAXQ9H814 394 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 BCCIPQ9P287 314 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 EID1Q9Y6B2 187 aa5.52□□□□□ -1.53
CDC42BPA-207ENST00000441725 WIPF1O43516 503 aa5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 NME1P15531 152 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 L1CAMP32004 1257 aa5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 TBX4P57082 545 aa5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 AP3B2Q13367 1082 aa5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 FAM50AQ14320 339 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 INTS3Q68E01 1043 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 NLRC3Q7RTR2 1065 aa5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 PSMD1Q99460 953 aa5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 ERBB4Q15303 1308 aa5.51□□□□□ -1.53
CDC42BPA-207ENST00000441725 VSIG8P0DPA2 414 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 CDC25BP30305 580 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 PCBP4P57723 403 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 ZNF468Q5VIY5 522 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 ELMSAN1Q6PJG2 1045 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 RNF180Q86T96 592 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 LRRC47Q8N1G4 583 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 EXOC2Q96KP1 924 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 SLC26A8Q96RN1 970 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 LPIN3Q9BQK8 851 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 CAAP1Q9H8G2 361 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 SLC6A14Q9UN76 642 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 GPR25O00155 361 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 RAPGEF3O95398 923 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 PLCG1P19174 1290 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 NFKB2Q00653 900 aa5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 GDF6Q6KF10 455 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 DDX54Q8TDD1 881 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 TSR2Q969E8 191 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 NCOA5Q9HCD5 579 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-207ENST00000441725 C2CD2LO14523 706 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 TNFRSF10CO14798 259 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 SIN3BO75182 1162 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 GSTM4Q03013 218 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 MLECQ14165 292 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 CT47A1Q5JQC4 288 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 CDCP2Q5VXM1 449 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 CCDC146Q8IYE0 955 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 SLC7A3Q8WY07 619 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 TNFRSF25Q93038 417 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 KISS1RQ969F8 398 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 CLUHP3Q96NS8 147 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 EPN3Q9H201 632 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 CNNM2Q9H8M5 875 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 KLHL3Q9UH77 587 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 FAM177BA6PVY3 158 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 ITGA6P23229 1130 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 POLR2BP30876 1174 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 YOD1Q5VVQ6 348 aaPredicted RBP5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 NRSN2Q9GZP1 204 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 CCDC86Q9H6F5 360 aaKnown RBP5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 MYH16Q9H6N6 1097 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 PHF24Q9UPV7 400 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 SNCAIPQ9Y6H5 919 aa5.49□□□□□ -1.53
CDC42BPA-207ENST00000441725 H3BRJ5 948 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 RFPL3O75679 317 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 CDC27P30260 824 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 GMPRP36959 345 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 CABP4P57796 275 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 SLC7A5Q01650 507 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 GNPTABQ3T906 1256 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 ZC3H12BQ5HYM0 836 aaKnown RBP5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 FAM209AQ5JX71 171 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 TXNDC11Q6PKC3 985 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 HDXQ7Z353 690 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 EXOC8Q8IYI6 725 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 GMCL1Q96IK5 515 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 ARHGEF4Q9NR80 690 aa5.48□□□□□ -1.53
CDC42BPA-207ENST00000441725 IQCA1LA6NCM1 817 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms