RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PTCD1O75127 700 aaKnown RBP6.43□□□□□ -1.38
PTPN4-206ENST00000441089 ADH6P28332 368 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 SCNN1DP51172 638 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
PTPN4-206ENST00000441089 HUNKP57058 714 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 RRS1Q15050 365 aaKnown RBP6.43□□□□□ -1.38
PTPN4-206ENST00000441089 TLR1Q15399 786 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 CDCA8Q53HL2 280 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 ARTNQ5T4W7 220 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 INTS3Q68E01 1043 aaKnown RBP6.43□□□□□ -1.38
PTPN4-206ENST00000441089 FBXO46Q6PJ61 603 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-206ENST00000441089 RTKN2Q8IZC4 609 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 PANK3Q9H999 370 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 RNF186Q9NXI6 227 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 CEP126Q9P2H0 1117 aa6.43□□□□□ -1.38
PTPN4-206ENST00000441089 SPATA31C1P0DKV0 1188 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 FBLN1P23142 703 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 IARSP41252 1262 aaKnown RBP6.42□□□□□ -1.38
PTPN4-206ENST00000441089 CABP4P57796 275 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 HSP90AB2PQ58FF8 381 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 INTS5Q6P9B9 1019 aaKnown RBP6.42□□□□□ -1.38
PTPN4-206ENST00000441089 C8orf86Q6ZUL3 223 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 MASTLQ96GX5 879 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 ZIC5Q96T25 663 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 ZNF277Q9NRM2 450 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-206ENST00000441089 GJA3Q9Y6H8 435 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 SOS1Q07889 1333 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-206ENST00000441089 COL15A1P39059 1388 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 ANKRD26Q9UPS8 1709 aa6.42□□□□□ -1.38
PTPN4-206ENST00000441089 PAPPA2Q9BXP8 1791 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 LAMA3Q16787 3333 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 KRTAP4-8A0A0G2JLE6 195 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 A0A1W2PNR3 127 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 PIK3R2O00459 728 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 KHNYNO15037 678 aaKnown RBP6.41□□□□□ -1.38
PTPN4-206ENST00000441089 NPHP1O15259 732 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 SRGNP10124 158 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 EPS15P42566 896 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 KIF23Q02241 960 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-206ENST00000441089 PRSS36Q5K4E3 855 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 RGMBQ6NW40 437 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 TBC1D9Q6ZT07 1266 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 PHTF2Q8N3S3 785 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 C7orf43Q8WVR3 580 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 PRM3Q9NNZ6 103 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 ZFP64Q9NPA5 681 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 ADARB2Q9NS39 739 aaKnown RBP6.41□□□□□ -1.38
PTPN4-206ENST00000441089 CACNA1AO00555 2505 aa6.41□□□□□ -1.38
PTPN4-206ENST00000441089 MYCP01106 439 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-206ENST00000441089 PRKCSHP14314 528 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-206ENST00000441089 ST5P78524 1137 aa6.4□□□□□ -1.38
PTPN4-206ENST00000441089 ZNF468Q5VIY5 522 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-206ENST00000441089 PRR5LQ6MZQ0 368 aa6.4□□□□□ -1.38
PTPN4-206ENST00000441089 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
PTPN4-206ENST00000441089 CDC37L1Q7L3B6 337 aa6.4□□□□□ -1.38
PTPN4-206ENST00000441089 SYNE4Q8N205 404 aa6.4□□□□□ -1.38
PTPN4-206ENST00000441089 GLIS2Q9BZE0 524 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-206ENST00000441089 ZNF408Q9H9D4 720 aa6.4□□□□□ -1.38
PTPN4-206ENST00000441089 VCANP13611 3396 aa6.4□□□□□ -1.38
PTPN4-206ENST00000441089 A0A087WZG4 1122 aa6.39□□□□□ -1.39
PTPN4-206ENST00000441089 FAM155AB1AL88 458 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-206ENST00000441089 NOM1Q5C9Z4 860 aaKnown RBP6.39□□□□□ -1.39
PTPN4-206ENST00000441089 NLRP8Q86W28 1048 aa6.39□□□□□ -1.39
PTPN4-206ENST00000441089 CNBD1Q8NA66 436 aa6.39□□□□□ -1.39
PTPN4-206ENST00000441089 PRKRIP1Q9H875 184 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-206ENST00000441089 PGAP2Q9UHJ9 254 aa6.39□□□□□ -1.39
PTPN4-206ENST00000441089 TBC1D2BQ9UPU7 963 aa6.39□□□□□ -1.39
PTPN4-206ENST00000441089 STARD13Q9Y3M8 1113 aa6.39□□□□□ -1.39
PTPN4-206ENST00000441089 ANP32CO43423 234 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 NPR1P16066 1061 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 ZNF157P51786 506 aaPredicted RBP6.38□□□□□ -1.39
PTPN4-206ENST00000441089 CNGB1Q14028 1251 aaPredicted RBP6.38□□□□□ -1.39
PTPN4-206ENST00000441089 C2orf69Q8N8R5 385 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 ZNF296Q8WUU4 475 aaPredicted RBP6.38□□□□□ -1.39
PTPN4-206ENST00000441089 CSRNP1Q96S65 589 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 PSMD1Q99460 953 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 AVENQ9NQS1 362 aaPredicted RBP6.38□□□□□ -1.39
PTPN4-206ENST00000441089 GPRC5DQ9NZD1 345 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 IQSEC3Q9UPP2 1182 aaPredicted RBP6.38□□□□□ -1.39
PTPN4-206ENST00000441089 SCN7AQ01118 1682 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 KIF20BQ96Q89 1820 aa6.38□□□□□ -1.39
PTPN4-206ENST00000441089 CDHR2Q9BYE9 1310 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 EFSO43281 561 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 CYP19A1P11511 503 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-206ENST00000441089 GTF2E1P29083 439 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-206ENST00000441089 ALDH1B1P30837 517 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 GRIK4Q16099 956 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 CCDC184Q52MB2 194 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 TBC1D9BQ66K14 1250 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 DNAJC10Q8IXB1 793 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 SETDB2Q96T68 719 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 GBA2Q9HCG7 927 aaPredicted RBP6.37□□□□□ -1.39
PTPN4-206ENST00000441089 BDP1A6H8Y1 2624 aa6.37□□□□□ -1.39
PTPN4-206ENST00000441089 NPC1L1Q9UHC9 1359 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 ELOA3CA0A087WX78 387 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-206ENST00000441089 ELOA3DA6NLF2 546 aaPredicted RBP6.36□□□□□ -1.39
PTPN4-206ENST00000441089 INHAP05111 366 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 FAM157BP0CG42 384 aa6.36□□□□□ -1.39
PTPN4-206ENST00000441089 MTHFSP49914 203 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms