RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 PDIA3P30101 505 aaKnown RBP23.76■■□□□ 1.39
VRK2-207ENST00000440705 RASSF7Q02833 373 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 CFAP100Q494V2 611 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 TMTC2Q8N394 836 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 UBAC1Q9BSL1 405 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 SYT17Q9BSW7 474 aa23.76■■□□□ 1.39
VRK2-207ENST00000440705 MMP14P50281 582 aa23.75■■□□□ 1.39
VRK2-207ENST00000440705 PLCD1P51178 756 aa23.75■■□□□ 1.39
VRK2-207ENST00000440705 ST3GAL1Q11201 340 aa23.75■■□□□ 1.39
VRK2-207ENST00000440705 PICALMQ13492 652 aa23.75■■□□□ 1.39
VRK2-207ENST00000440705 TTC6Q86TZ1 520 aa23.75■■□□□ 1.39
VRK2-207ENST00000440705 IQCA1Q86XH1 822 aa23.75■■□□□ 1.39
VRK2-207ENST00000440705 NAP1L2Q9ULW6 460 aaPredicted RBP23.75■■□□□ 1.39
VRK2-207ENST00000440705 KLF18A0A0U1RQI7 1052 aa23.74■■□□□ 1.39
VRK2-207ENST00000440705 PRDM1O75626 825 aa23.74■■□□□ 1.39
VRK2-207ENST00000440705 EVX2Q03828 476 aa23.74■■□□□ 1.39
VRK2-207ENST00000440705 SLC4A8Q2Y0W8 1093 aa23.74■■□□□ 1.39
VRK2-207ENST00000440705 SGMS1Q86VZ5 419 aa23.74■■□□□ 1.39
VRK2-207ENST00000440705 LY9Q9HBG7 655 aa23.74■■□□□ 1.39
VRK2-207ENST00000440705 ZBTB12Q9Y330 459 aaPredicted RBP23.74■■□□□ 1.39
VRK2-207ENST00000440705 NPM3O75607 178 aaKnown RBP23.73■■□□□ 1.39
VRK2-207ENST00000440705 IDI2Q9BXS1 227 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 MKNK2Q9HBH9 465 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 BRPF3Q9ULD4 1205 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 EIF6P56537 245 aaKnown RBP23.73■■□□□ 1.39
VRK2-207ENST00000440705 SCRN1Q12765 414 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 WTAPQ15007 396 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 NFXL1Q6ZNB6 911 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 ARHGAP27Q6ZUM4 889 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 LLPHQ9BRT6 129 aaKnown RBP23.73■■□□□ 1.39
VRK2-207ENST00000440705 OSBPL5Q9H0X9 879 aaPredicted RBP23.73■■□□□ 1.39
VRK2-207ENST00000440705 DDX4Q9NQI0 724 aaKnown RBP23.73■■□□□ 1.39
VRK2-207ENST00000440705 PCDHAC2Q9Y5I4 1007 aa23.73■■□□□ 1.39
VRK2-207ENST00000440705 FZD9O00144 591 aa23.72■■□□□ 1.39
VRK2-207ENST00000440705 RPS12P25398 132 aaKnown RBP23.72■■□□□ 1.39
VRK2-207ENST00000440705 RAB3GAP1Q15042 981 aa23.72■■□□□ 1.39
VRK2-207ENST00000440705 DLGAP5Q15398 846 aa23.72■■□□□ 1.39
VRK2-207ENST00000440705 C16orf86Q6ZW13 317 aa23.72■■□□□ 1.39
VRK2-207ENST00000440705 DYNLL2Q96FJ2 89 aa23.72■■□□□ 1.39
VRK2-207ENST00000440705 PRMT6Q96LA8 375 aaPredicted RBP23.72■■□□□ 1.39
VRK2-207ENST00000440705 CCDC69A6NI79 296 aa23.71■■□□□ 1.39
VRK2-207ENST00000440705 DHX16O60231 1041 aaKnown RBP23.71■■□□□ 1.39
VRK2-207ENST00000440705 ZNF444Q8N0Y2 327 aaPredicted RBP23.71■■□□□ 1.39
VRK2-207ENST00000440705 ZSCAN10Q96SZ4 725 aaPredicted RBP23.71■■□□□ 1.39
VRK2-207ENST00000440705 ZKSCAN3Q9BRR0 538 aa23.71■■□□□ 1.39
VRK2-207ENST00000440705 SPDYE2BA6NHP3 402 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 TSPY2A6NKD2 308 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 GOLGA8BA8MQT2 603 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 SPDYE6P0CI01 402 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 GJB2P29033 226 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 PRELPP51888 382 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 CCT2P78371 535 aaKnown RBP23.7■■□□□ 1.39
VRK2-207ENST00000440705 SYNE3Q6ZMZ3 975 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 MTMR14Q8NCE2 650 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 SLC12A7Q9Y666 1083 aa23.7■■□□□ 1.39
VRK2-207ENST00000440705 NFIAQ12857 509 aa23.7■■□□□ 1.38
VRK2-207ENST00000440705 APOA5Q6Q788 366 aa23.7■■□□□ 1.38
VRK2-207ENST00000440705 DHX36Q9H2U1 1008 aaKnown RBP23.7■■□□□ 1.38
VRK2-207ENST00000440705 TDRD3Q9H7E2 651 aaKnown RBP23.7■■□□□ 1.38
VRK2-207ENST00000440705 TMOD2Q9NZR1 351 aa23.7■■□□□ 1.38
VRK2-207ENST00000440705 TNKSO95271 1327 aa23.7■■□□□ 1.38
VRK2-207ENST00000440705 HLA-DOAP06340 250 aa23.69■■□□□ 1.38
VRK2-207ENST00000440705 PDIA4P13667 645 aaKnown RBP23.69■■□□□ 1.38
VRK2-207ENST00000440705 LMNB1P20700 586 aa23.69■■□□□ 1.38
VRK2-207ENST00000440705 CDK8P49336 464 aa23.69■■□□□ 1.38
VRK2-207ENST00000440705 SEC23AQ15436 765 aa23.69■■□□□ 1.38
VRK2-207ENST00000440705 HPS5Q9UPZ3 1129 aa23.69■■□□□ 1.38
VRK2-207ENST00000440705 ZBTB43O43298 467 aa23.68■■□□□ 1.38
VRK2-207ENST00000440705 CCDC178Q5BJE1 867 aa23.68■■□□□ 1.38
VRK2-207ENST00000440705 FAM47AQ5JRC9 791 aa23.68■■□□□ 1.38
VRK2-207ENST00000440705 SENP2Q9HC62 589 aa23.68■■□□□ 1.38
VRK2-207ENST00000440705 ENTPD3O75355 529 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 TFAP4Q01664 338 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 ENAHQ8N8S7 591 aaPredicted RBP23.67■■□□□ 1.38
VRK2-207ENST00000440705 FAM198AQ9UFP1 575 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 SERPINB13Q9UIV8 391 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 TAOK2Q9UL54 1235 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 RASA1P20936 1047 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 METAP2P50579 478 aaKnown RBP eCLIP23.67■■□□□ 1.38
VRK2-207ENST00000440705 RCAN1P53805 252 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 CACNB3P54284 484 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 IFIT1BQ5T764 474 aaKnown RBP23.67■■□□□ 1.38
VRK2-207ENST00000440705 SLC44A5Q8NCS7 719 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 DPF2Q92785 391 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 NCOA5Q9HCD5 579 aaKnown RBP23.67■■□□□ 1.38
VRK2-207ENST00000440705 SWAP70Q9UH65 585 aa23.67■■□□□ 1.38
VRK2-207ENST00000440705 TSPY3P0CV98 308 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 TSPY8P0CW00 308 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 PDCP20941 246 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 HMGN5P82970 282 aaKnown RBP23.66■■□□□ 1.38
VRK2-207ENST00000440705 GABPAQ06546 454 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 TCP10Q12799 353 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 SMARCC2Q8TAQ2 1214 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 EHD4Q9H223 541 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 TCP11L1Q9NUJ3 509 aa23.66■■□□□ 1.38
VRK2-207ENST00000440705 DICER1Q9UPY3 1922 aaKnown RBP23.66■■□□□ 1.38
VRK2-207ENST00000440705 MYO1BO43795 1136 aa23.65■■□□□ 1.38
VRK2-207ENST00000440705 ZNF280AP59817 542 aaPredicted RBP23.65■■□□□ 1.38
VRK2-207ENST00000440705 PKP1Q13835 747 aa23.65■■□□□ 1.38
VRK2-207ENST00000440705 NSUN7Q8NE18 718 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms