RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 OTUD7BQ6GQQ9 843 aa21.38■■□□□ 1.01
CCDC188-201ENST00000439765 MAPKAPK5Q8IW41 473 aa21.38■■□□□ 1.01
CCDC188-201ENST00000439765 TGFBRAP1Q8WUH2 860 aa21.38■■□□□ 1.01
CCDC188-201ENST00000439765 GLRX3O76003 335 aaKnown RBP21.37■■□□□ 1.01
CCDC188-201ENST00000439765 ADD2P35612 726 aa21.37■■□□□ 1.01
CCDC188-201ENST00000439765 TMED8Q6PL24 325 aaPredicted RBP21.37■■□□□ 1.01
CCDC188-201ENST00000439765 MS4A4AQ96JQ5 239 aa21.37■■□□□ 1.01
CCDC188-201ENST00000439765 MAGEB6P1A0A0J9YX57 407 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 SPDYE5A6NIY4 337 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 NPM3O75607 178 aaKnown RBP21.36■■□□□ 1.01
CCDC188-201ENST00000439765 SLURP2P0DP57 97 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 NUCB1Q02818 461 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 MLLT1Q03111 559 aaPredicted RBP21.36■■□□□ 1.01
CCDC188-201ENST00000439765 CHD1LQ86WJ1 897 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 PTPN18Q99952 460 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 RIOK1Q9BRS2 568 aaKnown RBP21.36■■□□□ 1.01
CCDC188-201ENST00000439765 ZNF341Q9BYN7 854 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 SNCAIPQ9Y6H5 919 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 KIAA0100Q14667 2235 aaKnown RBP21.36■■□□□ 1.01
CCDC188-201ENST00000439765 PTPRFP10586 1907 aa21.36■■□□□ 1.01
CCDC188-201ENST00000439765 HPS5Q9UPZ3 1129 aa21.35■■□□□ 1.01
CCDC188-201ENST00000439765 FAM196BA6NMK8 535 aa21.34■■□□□ 1.01
CCDC188-201ENST00000439765 PDE1AP54750 535 aa21.34■■□□□ 1.01
CCDC188-201ENST00000439765 SLC4A8Q2Y0W8 1093 aa21.34■■□□□ 1.01
CCDC188-201ENST00000439765 FBXO46Q6PJ61 603 aaPredicted RBP21.34■■□□□ 1.01
CCDC188-201ENST00000439765 CERS3Q8IU89 383 aa21.34■■□□□ 1.01
CCDC188-201ENST00000439765 KBTBD3Q8NAB2 608 aa21.34■■□□□ 1.01
CCDC188-201ENST00000439765 ZKSCAN4Q969J2 545 aaPredicted RBP21.34■■□□□ 1.01
CCDC188-201ENST00000439765 MYH8P13535 1937 aa21.34■■□□□ 1.01
CCDC188-201ENST00000439765 INPP5BP32019 993 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 USP5P45974 858 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 GTF2A2P52657 109 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 CRHR2Q13324 411 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 ERO1BQ86YB8 467 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 LCORLQ8N3X6 602 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 BRI3BPQ8WY22 251 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 OTUD5Q96G74 571 aa21.33■■□□□ 1.01
CCDC188-201ENST00000439765 SAP30BPQ9UHR5 308 aaKnown RBP21.33■■□□□ 1.01
CCDC188-201ENST00000439765 RBBP6Q7Z6E9 1792 aaKnown RBP21.33■■□□□ 1
CCDC188-201ENST00000439765 MBD4O95243 580 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 ARMT1Q9H993 441 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 STAP2Q9UGK3 403 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 PHIPQ8WWQ0 1821 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 CCL15-CCL14A0A0B4J2E2 113 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 UBE3CQ15386 1083 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 CCL15Q16663 113 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 PALD1Q9ULE6 856 aa21.32■■□□□ 1
CCDC188-201ENST00000439765 TNRC18O15417 2968 aaPredicted RBP21.31■■□□□ 1
CCDC188-201ENST00000439765 HTTP42858 3142 aa21.31■■□□□ 1
CCDC188-201ENST00000439765 FSD1Q9BTV5 496 aa21.31■■□□□ 1
CCDC188-201ENST00000439765 CRNKL1Q9BZJ0 848 aaKnown RBP21.31■■□□□ 1
CCDC188-201ENST00000439765 ZNF112Q9UJU3 913 aa21.31■■□□□ 1
CCDC188-201ENST00000439765 PPIL2Q13356 520 aa21.3■■□□□ 1
CCDC188-201ENST00000439765 SDR42E1Q8WUS8 393 aa21.3■■□□□ 1
CCDC188-201ENST00000439765 ERO1AQ96HE7 468 aa21.3■■□□□ 1
CCDC188-201ENST00000439765 PUS7LQ9H0K6 701 aaKnown RBP21.29■■□□□ 1
CCDC188-201ENST00000439765 DHX36Q9H2U1 1008 aaKnown RBP21.29■■□□□ 1
CCDC188-201ENST00000439765 ZCCHC17Q9NP64 241 aaKnown RBP21.29■■□□□ 1
CCDC188-201ENST00000439765 PHF20L1A8MW92 1017 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 IRF6O14896 467 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 CETPP11597 493 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 SOX10P56693 466 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 PPATQ06203 517 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 OTOP1Q7RTM1 612 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 PLEKHM2Q8IWE5 1019 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.28■■□□□ 1
CCDC188-201ENST00000439765 ZSWIM8A7E2V4 1837 aa21.28■■□□□ 1
CCDC188-201ENST00000439765 RNF113AO15541 343 aaKnown RBP21.27■■□□□ 1
CCDC188-201ENST00000439765 HLA-DOAP06340 250 aa21.27■■□□□ 1
CCDC188-201ENST00000439765 SP3Q02447 781 aa21.27■■□□□ 1
CCDC188-201ENST00000439765 SNAPC2Q13487 334 aa21.27■■□□□ 1
CCDC188-201ENST00000439765 TAF1CQ15572 869 aaPredicted RBP21.27■■□□□ 1
CCDC188-201ENST00000439765 NOL9Q5SY16 702 aaKnown RBP21.27■■□□□ 1
CCDC188-201ENST00000439765 CRACR2BQ8N4Y2 399 aaPredicted RBP21.27■■□□□ 1
CCDC188-201ENST00000439765 APPBP2Q92624 585 aa21.27■■□□□ 1
CCDC188-201ENST00000439765 PI4KBQ9UBF8 816 aa21.27■■□□□ 1
CCDC188-201ENST00000439765 TRIM17Q9Y577 477 aa21.27■■□□□ 1
CCDC188-201ENST00000439765 PRKAB2O43741 272 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 MAP3K10Q02779 954 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 ZFYVE28Q9HCC9 887 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 HERC5Q9UII4 1024 aaKnown RBP21.26■□□□□ 0.99
CCDC188-201ENST00000439765 TBC1D12O60347 775 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 ZFYP08048 801 aaPredicted RBP21.26■□□□□ 0.99
CCDC188-201ENST00000439765 LRRFIP1Q32MZ4 808 aaKnown RBP21.26■□□□□ 0.99
CCDC188-201ENST00000439765 CD99L2Q8TCZ2 262 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 OSBP2Q969R2 916 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 EVI5LQ96CN4 794 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 TRIM34Q9BYJ4 488 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 DNAJC18Q9H819 358 aa21.26■□□□□ 0.99
CCDC188-201ENST00000439765 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.26■□□□□ 0.99
CCDC188-201ENST00000439765 MGAMO43451 1857 aa21.25■□□□□ 0.99
CCDC188-201ENST00000439765 TRIM6-TRIM34B2RNG4 842 aa21.25■□□□□ 0.99
CCDC188-201ENST00000439765 SCYL3Q8IZE3 742 aa21.25■□□□□ 0.99
CCDC188-201ENST00000439765 DCP1AQ9NPI6 582 aaPredicted RBP21.25■□□□□ 0.99
CCDC188-201ENST00000439765 MCM9Q9NXL9 1143 aa21.25■□□□□ 0.99
CCDC188-201ENST00000439765 KCNH4Q9UQ05 1017 aa21.25■□□□□ 0.99
CCDC188-201ENST00000439765 CENPFP49454 3210 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms