RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 DDX4Q9NQI0 724 aaKnown RBP17.49■□□□□ 0.39
LINC01088-201ENST00000437737 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 ABCF2Q9UG63 623 aa17.49■□□□□ 0.39
LINC01088-201ENST00000437737 SPP2Q13103 211 aa17.48■□□□□ 0.39
LINC01088-201ENST00000437737 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
LINC01088-201ENST00000437737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC01088-201ENST00000437737 GJD2Q9UKL4 321 aa17.48■□□□□ 0.39
LINC01088-201ENST00000437737 OGDHLQ9ULD0 1010 aa17.48■□□□□ 0.39
LINC01088-201ENST00000437737 PTPRCP08575 1304 aa17.47■□□□□ 0.39
LINC01088-201ENST00000437737 FAM196BA6NMK8 535 aa17.47■□□□□ 0.39
LINC01088-201ENST00000437737 CYP2B6P20813 491 aa17.47■□□□□ 0.39
LINC01088-201ENST00000437737 HMGCS2P54868 508 aa17.47■□□□□ 0.39
LINC01088-201ENST00000437737 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
LINC01088-201ENST00000437737 ZNF280CQ8ND82 737 aa17.47■□□□□ 0.39
LINC01088-201ENST00000437737 TRIB2Q92519 343 aa17.47■□□□□ 0.39
LINC01088-201ENST00000437737 OSBPL5Q9H0X9 879 aaPredicted RBP17.47■□□□□ 0.39
LINC01088-201ENST00000437737 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
LINC01088-201ENST00000437737 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC01088-201ENST00000437737 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.46■□□□□ 0.39
LINC01088-201ENST00000437737 ASCC2Q9H1I8 757 aaPredicted RBP17.46■□□□□ 0.39
LINC01088-201ENST00000437737 FBXO3Q9UK99 471 aa17.46■□□□□ 0.39
LINC01088-201ENST00000437737 PFASO15067 1338 aa17.46■□□□□ 0.38
LINC01088-201ENST00000437737 TBC1D12O60347 775 aa17.45■□□□□ 0.38
LINC01088-201ENST00000437737 CIAO1O76071 339 aa17.45■□□□□ 0.38
LINC01088-201ENST00000437737 CCDC102BQ68D86 513 aa17.45■□□□□ 0.38
LINC01088-201ENST00000437737 TBC1D2Q9BYX2 928 aa17.45■□□□□ 0.38
LINC01088-201ENST00000437737 MROH7-TTC4A0A0A0MT08 1334 aa17.45■□□□□ 0.38
LINC01088-201ENST00000437737 ADORA1P30542 326 aa17.44■□□□□ 0.38
LINC01088-201ENST00000437737 IRX3P78415 501 aaPredicted RBP17.44■□□□□ 0.38
LINC01088-201ENST00000437737 MDM2Q00987 491 aaPredicted RBP17.44■□□□□ 0.38
LINC01088-201ENST00000437737 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
LINC01088-201ENST00000437737 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
LINC01088-201ENST00000437737 FAM163AQ96GL9 167 aaPredicted RBP17.44■□□□□ 0.38
LINC01088-201ENST00000437737 NUDT12Q9BQG2 462 aa17.44■□□□□ 0.38
LINC01088-201ENST00000437737 AS3MTQ9HBK9 375 aa17.44■□□□□ 0.38
LINC01088-201ENST00000437737 USP17L5A8MUK1 530 aa17.43■□□□□ 0.38
LINC01088-201ENST00000437737 IL15P40933 162 aaPredicted RBP17.43■□□□□ 0.38
LINC01088-201ENST00000437737 MAP3K21Q5TCX8 1036 aa17.43■□□□□ 0.38
LINC01088-201ENST00000437737 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
LINC01088-201ENST00000437737 MORF4L1Q9UBU8 362 aa17.43■□□□□ 0.38
LINC01088-201ENST00000437737 ZKSCAN1P17029 563 aaPredicted RBP17.42■□□□□ 0.38
LINC01088-201ENST00000437737 PDE3AQ14432 1141 aa17.42■□□□□ 0.38
LINC01088-201ENST00000437737 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
LINC01088-201ENST00000437737 FRMPD3Q5JV73 1810 aa17.42■□□□□ 0.38
LINC01088-201ENST00000437737 GPR75-ASB3A0A0A6YYF3 556 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 CENPBP07199 599 aaPredicted RBP17.41■□□□□ 0.38
LINC01088-201ENST00000437737 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
LINC01088-201ENST00000437737 CAP2P40123 477 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 RHBDL3P58872 404 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 MECOMQ03112 1051 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 LRRC26Q2I0M4 334 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 CCAR1Q8IX12 1150 aaKnown RBP17.41■□□□□ 0.38
LINC01088-201ENST00000437737 TRMT44Q8IYL2 757 aaKnown RBP17.41■□□□□ 0.38
LINC01088-201ENST00000437737 FAM161BQ96MY7 647 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 TMOD4Q9NZQ9 345 aa17.41■□□□□ 0.38
LINC01088-201ENST00000437737 PDS5AQ29RF7 1337 aaKnown RBP17.41■□□□□ 0.38
LINC01088-201ENST00000437737 COL2A1P02458 1487 aaPredicted RBP17.4■□□□□ 0.38
LINC01088-201ENST00000437737 ZBTB22O15209 634 aa17.4■□□□□ 0.38
LINC01088-201ENST00000437737 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
LINC01088-201ENST00000437737 COL6A1P12109 1028 aa17.4■□□□□ 0.38
LINC01088-201ENST00000437737 XRCC5P13010 732 aaKnown RBP17.4■□□□□ 0.38
LINC01088-201ENST00000437737 CACNB2Q08289 660 aaPredicted RBP17.4■□□□□ 0.38
LINC01088-201ENST00000437737 MTMR2Q13614 643 aa17.4■□□□□ 0.38
LINC01088-201ENST00000437737 GPRC5AQ8NFJ5 357 aa17.4■□□□□ 0.38
LINC01088-201ENST00000437737 GUCD1Q96NT3 240 aa17.4■□□□□ 0.38
LINC01088-201ENST00000437737 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
LINC01088-201ENST00000437737 UNC80Q8N2C7 3258 aa17.39■□□□□ 0.38
LINC01088-201ENST00000437737 MAST2Q6P0Q8 1798 aa17.39■□□□□ 0.37
LINC01088-201ENST00000437737 PEX10O60683 326 aa17.39■□□□□ 0.37
LINC01088-201ENST00000437737 CCND3P30281 292 aaPredicted RBP17.39■□□□□ 0.37
LINC01088-201ENST00000437737 TIMM10P62072 90 aa17.39■□□□□ 0.37
LINC01088-201ENST00000437737 RRP1BQ14684 758 aaKnown RBP17.39■□□□□ 0.37
LINC01088-201ENST00000437737 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
LINC01088-201ENST00000437737 P2RX7Q99572 595 aaKnown RBP17.39■□□□□ 0.37
LINC01088-201ENST00000437737 LBHD1Q9BQE6 289 aaPredicted RBP17.39■□□□□ 0.37
LINC01088-201ENST00000437737 POTEB2H3BUK9 544 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 LDHCP07864 332 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 MAPK4P31152 587 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 RGS2P41220 211 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 HERVK_113P62684 666 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 GSTO1P78417 241 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 ZNF697Q5TEC3 545 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 FAM109BQ6ICB4 259 aaPredicted RBP17.38■□□□□ 0.37
LINC01088-201ENST00000437737 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
LINC01088-201ENST00000437737 TXNRD2Q9NNW7 524 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 HERC5Q9UII4 1024 aaKnown RBP17.38■□□□□ 0.37
LINC01088-201ENST00000437737 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
LINC01088-201ENST00000437737 MAP4K4O95819 1239 aaPredicted RBP17.37■□□□□ 0.37
LINC01088-201ENST00000437737 BACE1P56817 501 aa17.37■□□□□ 0.37
LINC01088-201ENST00000437737 CCL14Q16627 93 aa17.37■□□□□ 0.37
LINC01088-201ENST00000437737 LHX8Q68G74 356 aa17.37■□□□□ 0.37
LINC01088-201ENST00000437737 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
LINC01088-201ENST00000437737 SIPA1L1O43166 1804 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 HOXA7P31268 230 aaPredicted RBP17.36■□□□□ 0.37
LINC01088-201ENST00000437737 MVPQ14764 893 aaKnown RBP17.36■□□□□ 0.37
LINC01088-201ENST00000437737 GPR142Q7Z601 462 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 TEX11Q8IYF3 940 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 ZNF384Q8TF68 577 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms