RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 PTPN12Q05209 780 aaKnown RBP5.3□□□□□ -1.56
SNRPEP4-201ENST00000435815 ZC3H12AQ5D1E8 599 aaKnown RBP5.3□□□□□ -1.56
SNRPEP4-201ENST00000435815 PRDM10Q9NQV6 1147 aa5.3□□□□□ -1.56
SNRPEP4-201ENST00000435815 GTF2IRD1Q9UHL9 959 aa5.3□□□□□ -1.56
SNRPEP4-201ENST00000435815 CSADQ9Y600 493 aa5.3□□□□□ -1.56
SNRPEP4-201ENST00000435815 IGF2BP3O00425 579 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 EOMESO95936 686 aa5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 TMEM253P0C7T8 217 aa5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 FKBP4Q02790 459 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 RPS26P11Q5JNZ5 115 aaPredicted RBP5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 PRPF40BQ6NWY9 871 aaKnown RBP5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 RNF214Q8ND24 703 aa5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 HSPA12BQ96MM6 686 aa5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 PUS7Q96PZ0 661 aaKnown RBP5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 GPN3Q9UHW5 284 aaPredicted RBP5.29□□□□□ -1.56
SNRPEP4-201ENST00000435815 TCAF2A6NFQ2 919 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 TMEM88BA6NKF7 163 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 GNAT3A8MTJ3 354 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 PRR33A8MZF0 331 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 ETV2O00321 342 aaPredicted RBP5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 HMGB1P09429 215 aaKnown RBP5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 HSP90B1P14625 803 aaKnown RBP5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 NTF4P34130 210 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 CLCN7P51798 805 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 PPM1JQ5JR12 505 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 CIAPIN1Q6FI81 312 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 MPRIPQ6WCQ1 1025 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 EPB41L4BQ9H329 900 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 DCP1AQ9NPI6 582 aaPredicted RBP5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 SEMA3GQ9NS98 782 aa5.28□□□□□ -1.56
SNRPEP4-201ENST00000435815 CNTNAP4Q9C0A0 1308 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 CARNS1A5YM72 827 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 NUAK1O60285 661 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 CPNE3O75131 537 aaKnown RBP5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 GADD45BO75293 160 aaPredicted RBP5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 GDNFP39905 211 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 ERVK-24P63145 666 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 SF3B2Q13435 895 aaKnown RBP5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 GRM2Q14416 872 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 CDKAL1Q5VV42 579 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 MAP1SQ66K74 1059 aaPredicted RBP5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 PHLDB3Q6NSJ2 640 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 SULF2Q8IWU5 870 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 GPBAR1Q8TDU6 330 aa5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 SMG5Q9UPR3 1016 aaKnown RBP5.27□□□□□ -1.57
SNRPEP4-201ENST00000435815 H3BS24 57 aa5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 MED14OSP0DP75 135 aa5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 CDK11BP21127 795 aaKnown RBP5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 LINC00310P59036 64 aa5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 CCDC74AQ96AQ1 378 aa5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 IRF2BPLQ9H1B7 796 aa5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 PRDM5Q9NQX1 630 aaPredicted RBP5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 CDK11AQ9UQ88 783 aaPredicted RBP5.26□□□□□ -1.57
SNRPEP4-201ENST00000435815 A0A0G2JLL6 359 aaPredicted RBP5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 DCDC2CA8MYV0 355 aa5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 RBM25P49756 843 aaKnown RBP5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 MFAP1P55081 439 aaKnown RBP5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 FCGRTP55899 365 aa5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 ERVFC1P60507 584 aa5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 AEBP1Q8IUX7 1158 aa5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 FOXQ1Q9C009 403 aa5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 TMEM39AQ9NV64 488 aa5.25□□□□□ -1.57
SNRPEP4-201ENST00000435815 TMCO4Q5TGY1 634 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 DTHD1Q6ZMT9 781 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 ARMCX6Q7L4S7 300 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 C12orf40Q86WS4 652 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 EPS8L3Q8TE67 593 aaKnown RBP5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 RELTQ969Z4 430 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 ACSBG1Q96GR2 724 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 SLAMF8Q9P0V8 285 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 BRPF3Q9ULD4 1205 aa5.24□□□□□ -1.57
SNRPEP4-201ENST00000435815 FAM155AB1AL88 458 aaPredicted RBP5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 EIF1AYO14602 144 aaKnown RBP5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 SLITRK5O94991 958 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 GLDCP23378 1020 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 ARNTP27540 789 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 FGD1P98174 961 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 HNRNPUQ00839 825 aaKnown RBP eCLIP5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 PPP2R3AQ06190 1150 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 PI16Q6UXB8 463 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 NPAS4Q8IUM7 802 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 ABHD4Q8TB40 342 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 CHMP4AQ9BY43 222 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 GZF1Q9H116 711 aaPredicted RBP5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 MAPK8IP1Q9UQF2 711 aa5.23□□□□□ -1.57
SNRPEP4-201ENST00000435815 DNAJC25-GNG10A0A024R161 153 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 H3BRB1 525 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 BMP7P18075 431 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 RALGPS1Q5JS13 557 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 TTC6Q86TZ1 520 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 GRIN3AQ8TCU5 1115 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 KCNN1Q92952 543 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 ALPK1Q96QP1 1244 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 DNAJC25Q9H1X3 360 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 TUT1Q9H6E5 874 aaKnown RBP5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 CBX8Q9HC52 389 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 PARD6AQ9NPB6 346 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 PICK1Q9NRD5 415 aa5.22□□□□□ -1.57
SNRPEP4-201ENST00000435815 TRAK1Q9UPV9 953 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms