RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 RHPN1Q8TCX5 695 aa16.26■□□□□ 0.19
EDEM1-202ENST00000434243 PI4KBQ9UBF8 816 aa16.26■□□□□ 0.19
EDEM1-202ENST00000434243 PPP4CP60510 307 aa16.25■□□□□ 0.19
EDEM1-202ENST00000434243 DYNLL1P63167 89 aaKnown RBP16.25■□□□□ 0.19
EDEM1-202ENST00000434243 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
EDEM1-202ENST00000434243 CRACR2BQ8N4Y2 399 aaPredicted RBP16.25■□□□□ 0.19
EDEM1-202ENST00000434243 ARMC5Q96C12 935 aa16.25■□□□□ 0.19
EDEM1-202ENST00000434243 TMEM106CQ9BVX2 250 aa16.25■□□□□ 0.19
EDEM1-202ENST00000434243 DHX36Q9H2U1 1008 aaKnown RBP16.25■□□□□ 0.19
EDEM1-202ENST00000434243 CHMP4BQ9H444 224 aaKnown RBP16.25■□□□□ 0.19
EDEM1-202ENST00000434243 IGSF3O75054 1194 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 GNRH1P01148 92 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 HOXD10P28358 340 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 MAP3K12Q12852 859 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 SPP2Q13103 211 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 SLC4A8Q2Y0W8 1093 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 CLASRPQ8N2M8 674 aaKnown RBP16.24■□□□□ 0.19
EDEM1-202ENST00000434243 MAGEB6Q8N7X4 407 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 SMCR8Q8TEV9 937 aaPredicted RBP16.24■□□□□ 0.19
EDEM1-202ENST00000434243 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
EDEM1-202ENST00000434243 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
EDEM1-202ENST00000434243 HERC5Q9UII4 1024 aaKnown RBP16.24■□□□□ 0.19
EDEM1-202ENST00000434243 FLT1P17948 1338 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
EDEM1-202ENST00000434243 CAP2P40123 477 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 USP5P45974 858 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 SH3TC2Q8TF17 1288 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 KIF1BPQ96EK5 621 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 ZNF333Q96JL9 665 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 PALD1Q9ULE6 856 aa16.23■□□□□ 0.19
EDEM1-202ENST00000434243 USP17L5A8MUK1 530 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 HLA-DOAP06340 250 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 CTGFP29279 349 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 PRMT2P55345 433 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 FOXP4Q8IVH2 680 aaPredicted RBP16.22■□□□□ 0.19
EDEM1-202ENST00000434243 ZNF280CQ8ND82 737 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 RAET1EQ8TD07 263 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 TRIM47Q96LD4 638 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 AGTPBP1Q9UPW5 1226 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
EDEM1-202ENST00000434243 DOCK2Q92608 1830 aa16.22■□□□□ 0.19
EDEM1-202ENST00000434243 ADGRA2Q96PE1 1338 aa16.21■□□□□ 0.19
EDEM1-202ENST00000434243 EN2P19622 333 aaPredicted RBP16.21■□□□□ 0.19
EDEM1-202ENST00000434243 OSBPP22059 807 aa16.21■□□□□ 0.19
EDEM1-202ENST00000434243 FCGRTP55899 365 aa16.21■□□□□ 0.19
EDEM1-202ENST00000434243 RRP1BQ14684 758 aaKnown RBP16.21■□□□□ 0.19
EDEM1-202ENST00000434243 DNAJC2Q99543 621 aaKnown RBP16.21■□□□□ 0.19
EDEM1-202ENST00000434243 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
EDEM1-202ENST00000434243 SLC45A1Q9Y2W3 748 aa16.21■□□□□ 0.19
EDEM1-202ENST00000434243 MYPNQ86TC9 1320 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 BCRP11274 1271 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 HMGCS2P54868 508 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 TTF1Q15361 905 aaPredicted RBP16.2■□□□□ 0.18
EDEM1-202ENST00000434243 TREML2Q5T2D2 321 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 CERS3Q8IU89 383 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 SIRT2Q8IXJ6 389 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 PNMA3Q9UL41 463 aa16.2■□□□□ 0.18
EDEM1-202ENST00000434243 GDF11O95390 407 aa16.19■□□□□ 0.18
EDEM1-202ENST00000434243 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
EDEM1-202ENST00000434243 ANKRD13CQ8N6S4 541 aa16.19■□□□□ 0.18
EDEM1-202ENST00000434243 PROCA1Q8NCQ7 364 aaPredicted RBP16.19■□□□□ 0.18
EDEM1-202ENST00000434243 BIN2Q9UBW5 565 aaPredicted RBP16.19■□□□□ 0.18
EDEM1-202ENST00000434243 GOLIM4O00461 696 aa16.18■□□□□ 0.18
EDEM1-202ENST00000434243 ASNSP08243 561 aa16.18■□□□□ 0.18
EDEM1-202ENST00000434243 PRKCZQ05513 592 aa16.18■□□□□ 0.18
EDEM1-202ENST00000434243 PABPC4Q13310 644 aaKnown RBP eCLIP16.18■□□□□ 0.18
EDEM1-202ENST00000434243 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
EDEM1-202ENST00000434243 DNAJC18Q9H819 358 aa16.18■□□□□ 0.18
EDEM1-202ENST00000434243 TMOD4Q9NZQ9 345 aa16.18■□□□□ 0.18
EDEM1-202ENST00000434243 MAGEB6P1A0A0J9YX57 407 aa16.17■□□□□ 0.18
EDEM1-202ENST00000434243 TNPO2O14787 897 aaKnown RBP16.17■□□□□ 0.18
EDEM1-202ENST00000434243 GRK4P32298 578 aa16.17■□□□□ 0.18
EDEM1-202ENST00000434243 MTMR2Q13614 643 aa16.17■□□□□ 0.18
EDEM1-202ENST00000434243 PDE3AQ14432 1141 aa16.17■□□□□ 0.18
EDEM1-202ENST00000434243 PRPF38BQ5VTL8 546 aaKnown RBP16.17■□□□□ 0.18
EDEM1-202ENST00000434243 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
EDEM1-202ENST00000434243 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
EDEM1-202ENST00000434243 GABRQQ9UN88 632 aa16.17■□□□□ 0.18
EDEM1-202ENST00000434243 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
EDEM1-202ENST00000434243 JAG1P78504 1218 aa16.16■□□□□ 0.18
EDEM1-202ENST00000434243 SHROOM1Q2M3G4 852 aaPredicted RBP16.16■□□□□ 0.18
EDEM1-202ENST00000434243 TMED8Q6PL24 325 aaPredicted RBP16.16■□□□□ 0.18
EDEM1-202ENST00000434243 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
EDEM1-202ENST00000434243 METTL16Q86W50 562 aaKnown RBP16.16■□□□□ 0.18
EDEM1-202ENST00000434243 WDR18Q9BV38 432 aa16.16■□□□□ 0.18
EDEM1-202ENST00000434243 DOCK1Q14185 1865 aa16.16■□□□□ 0.18
EDEM1-202ENST00000434243 PDE6AP16499 860 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 BACE1P56817 501 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 UBXN2AP68543 259 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
EDEM1-202ENST00000434243 MTFR1Q15390 333 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
EDEM1-202ENST00000434243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
EDEM1-202ENST00000434243 EDC3Q96F86 508 aaKnown RBP16.15■□□□□ 0.18
EDEM1-202ENST00000434243 ASCC2Q9H1I8 757 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms