RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 A0A1W2PQ27 194 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 A0A1W2PQ64 194 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 A0A1W2PQD8 194 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 U2AF2P26368 475 aaKnown RBP eCLIP17.01■□□□□ 0.31
RFTN1-203ENST00000432519 SLC39A14Q15043 492 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 TRAPPC3LQ5T215 181 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 LY75O60449 1722 aa17.01■□□□□ 0.31
RFTN1-203ENST00000432519 AFF2P51816 1311 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 FANCBQ8NB91 859 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 UBAC1Q9BSL1 405 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 PFKFB1P16118 471 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 NR5A1Q13285 461 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 SEPT12Q8IYM1 358 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 CRACR2BQ8N4Y2 399 aaPredicted RBP17■□□□□ 0.31
RFTN1-203ENST00000432519 OXER1Q8TDS5 423 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 SDF4Q9BRK5 362 aa17■□□□□ 0.31
RFTN1-203ENST00000432519 RGL2O15211 777 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 TOB1P50616 345 aaPredicted RBP16.99■□□□□ 0.31
RFTN1-203ENST00000432519 GNL2Q13823 731 aaKnown RBP16.99■□□□□ 0.31
RFTN1-203ENST00000432519 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
RFTN1-203ENST00000432519 SHC4Q6S5L8 630 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 RNF41Q9H4P4 317 aaPredicted RBP16.99■□□□□ 0.31
RFTN1-203ENST00000432519 PYCARDQ9ULZ3 195 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 DUOX1Q9NRD9 1551 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
RFTN1-203ENST00000432519 ERICH2A1L162 156 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 ZNF202O95125 648 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
RFTN1-203ENST00000432519 ESR2Q92731 530 aa16.99■□□□□ 0.31
RFTN1-203ENST00000432519 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
RFTN1-203ENST00000432519 NID2Q14112 1375 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 BIN1O00499 593 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 PTGS1P23219 599 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 GRIN1Q05586 938 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 FAM47AQ5JRC9 791 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 SPECC1Q5M775 1068 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
RFTN1-203ENST00000432519 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 ANKIB1Q9P2G1 1089 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 R3HCC1Q9Y3T6 440 aaKnown RBP16.98■□□□□ 0.31
RFTN1-203ENST00000432519 STK36Q9NRP7 1315 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 CTAGE5O15320 804 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 PLEKHA8P1O95397 391 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 STX1AQ16623 288 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 PLA2G4DQ86XP0 818 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 DIS3L2Q8IYB7 885 aaKnown RBP16.98■□□□□ 0.31
RFTN1-203ENST00000432519 ZSCAN10Q96SZ4 725 aaPredicted RBP16.98■□□□□ 0.31
RFTN1-203ENST00000432519 TRIM5Q9C035 493 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 ANKRD2Q9GZV1 360 aa16.98■□□□□ 0.31
RFTN1-203ENST00000432519 MMP1P03956 469 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 HSPA1LP34931 641 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 ZNF75DP51815 510 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 ISM2Q6H9L7 571 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 FAM205CA6NFA0 338 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 TRIM29Q14134 588 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 DIXDC1Q155Q3 683 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 PRR5LQ6MZQ0 368 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 CNBD1Q8NA66 436 aa16.97■□□□□ 0.31
RFTN1-203ENST00000432519 SEMA3EO15041 775 aa16.96■□□□□ 0.31
RFTN1-203ENST00000432519 CMA1P23946 247 aa16.96■□□□□ 0.31
RFTN1-203ENST00000432519 LRMPQ12912 555 aa16.96■□□□□ 0.31
RFTN1-203ENST00000432519 NOSTRINQ8IVI9 506 aa16.96■□□□□ 0.31
RFTN1-203ENST00000432519 KIAA1468Q9P260 1216 aa16.96■□□□□ 0.31
RFTN1-203ENST00000432519 FUT2Q10981 343 aa16.96■□□□□ 0.31
RFTN1-203ENST00000432519 FGRP09769 529 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 USP17L8P0C7I0 530 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 TROAPQ12815 778 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 PKN1Q16512 942 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 EARS2Q5JPH6 523 aaKnown RBP16.95■□□□□ 0.3
RFTN1-203ENST00000432519 CCDC186Q7Z3E2 898 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
RFTN1-203ENST00000432519 VEGFAP15692 232 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-203ENST00000432519 GRAPQ13588 217 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 NOM1Q5C9Z4 860 aaKnown RBP16.95■□□□□ 0.3
RFTN1-203ENST00000432519 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-203ENST00000432519 AOPEPQ8N6M6 819 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
RFTN1-203ENST00000432519 PIBF1Q8WXW3 757 aa16.95■□□□□ 0.3
RFTN1-203ENST00000432519 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
RFTN1-203ENST00000432519 GYS1P13807 737 aa16.94■□□□□ 0.3
RFTN1-203ENST00000432519 ATP2B1P20020 1258 aa16.94■□□□□ 0.3
RFTN1-203ENST00000432519 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
RFTN1-203ENST00000432519 TRIM22Q8IYM9 498 aa16.94■□□□□ 0.3
RFTN1-203ENST00000432519 TMTC2Q8N394 836 aa16.94■□□□□ 0.3
RFTN1-203ENST00000432519 HPSEQ9Y251 543 aa16.94■□□□□ 0.3
RFTN1-203ENST00000432519 PCDHB6Q9Y5E3 794 aa16.94■□□□□ 0.3
RFTN1-203ENST00000432519 NOLC1Q14978 699 aaKnown RBP eCLIP16.94■□□□□ 0.3
RFTN1-203ENST00000432519 MYH6P13533 1939 aa16.94■□□□□ 0.3
RFTN1-203ENST00000432519 WNT7AO00755 349 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 DEXIO95424 95 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 ANO10Q9NW15 660 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 ADAMTS3O15072 1205 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 PPP6R2O75170 966 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 GPSM2P81274 684 aa16.93■□□□□ 0.3
RFTN1-203ENST00000432519 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms