RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 RPTORQ8N122 1335 aa27.42■■□□□ 1.98
PTPRA-207ENST00000431048 PABPC4Q13310 644 aaKnown RBP eCLIP27.42■■□□□ 1.98
PTPRA-207ENST00000431048 CCDC84Q86UT8 332 aaPredicted RBP27.42■■□□□ 1.98
PTPRA-207ENST00000431048 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.42■■□□□ 1.98
PTPRA-207ENST00000431048 SPP2Q13103 211 aa27.41■■□□□ 1.98
PTPRA-207ENST00000431048 ZNF280CQ8ND82 737 aa27.41■■□□□ 1.98
PTPRA-207ENST00000431048 NBPF3Q9H094 633 aa27.41■■□□□ 1.98
PTPRA-207ENST00000431048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.41■■□□□ 1.98
PTPRA-207ENST00000431048 HMX1Q9NP08 348 aaPredicted RBP27.41■■□□□ 1.98
PTPRA-207ENST00000431048 PA2G4Q9UQ80 394 aaKnown RBP27.4■■□□□ 1.98
PTPRA-207ENST00000431048 ALPK3Q96L96 1907 aa27.39■■□□□ 1.98
PTPRA-207ENST00000431048 MNX1P50219 401 aaPredicted RBP27.39■■□□□ 1.98
PTPRA-207ENST00000431048 TIMM10P62072 90 aa27.39■■□□□ 1.98
PTPRA-207ENST00000431048 MECOMQ03112 1051 aa27.39■■□□□ 1.98
PTPRA-207ENST00000431048 SH3D19Q5HYK7 790 aa27.39■■□□□ 1.98
PTPRA-207ENST00000431048 ERICH6Q7L0X2 663 aa27.39■■□□□ 1.98
PTPRA-207ENST00000431048 LRIT3Q3SXY7 679 aa27.38■■□□□ 1.97
PTPRA-207ENST00000431048 C7orf61Q8IZ16 206 aa27.38■■□□□ 1.97
PTPRA-207ENST00000431048 MORF4L1Q9UBU8 362 aa27.38■■□□□ 1.97
PTPRA-207ENST00000431048 OGDHLQ9ULD0 1010 aa27.38■■□□□ 1.97
PTPRA-207ENST00000431048 COL2A1P02458 1487 aaPredicted RBP27.38■■□□□ 1.97
PTPRA-207ENST00000431048 LDHCP07864 332 aa27.37■■□□□ 1.97
PTPRA-207ENST00000431048 CAP2P40123 477 aa27.37■■□□□ 1.97
PTPRA-207ENST00000431048 ZNF384Q8TF68 577 aa27.37■■□□□ 1.97
PTPRA-207ENST00000431048 ASCC2Q9H1I8 757 aaPredicted RBP27.37■■□□□ 1.97
PTPRA-207ENST00000431048 AKAP2Q9Y2D5 859 aa27.37■■□□□ 1.97
PTPRA-207ENST00000431048 CUL9Q8IWT3 2517 aa27.36■■□□□ 1.97
PTPRA-207ENST00000431048 USP17L5A8MUK1 530 aa27.36■■□□□ 1.97
PTPRA-207ENST00000431048 HMGCS2P54868 508 aa27.36■■□□□ 1.97
PTPRA-207ENST00000431048 SLFN5Q08AF3 891 aa27.36■■□□□ 1.97
PTPRA-207ENST00000431048 MVPQ14764 893 aaKnown RBP27.36■■□□□ 1.97
PTPRA-207ENST00000431048 XAGE2Q96GT9 111 aa27.36■■□□□ 1.97
PTPRA-207ENST00000431048 ZMYND8Q9ULU4 1186 aaPredicted RBP27.36■■□□□ 1.97
PTPRA-207ENST00000431048 GSTO1P78417 241 aa27.35■■□□□ 1.97
PTPRA-207ENST00000431048 C11orf49Q9H6J7 331 aa27.35■■□□□ 1.97
PTPRA-207ENST00000431048 LOC285556D6RIA3 1793 aa27.35■■□□□ 1.97
PTPRA-207ENST00000431048 A0A1B0GUL7 405 aa27.34■■□□□ 1.97
PTPRA-207ENST00000431048 FAM196BA6NMK8 535 aa27.34■■□□□ 1.97
PTPRA-207ENST00000431048 TRIM32Q13049 653 aa27.34■■□□□ 1.97
PTPRA-207ENST00000431048 MAP3K21Q5TCX8 1036 aa27.34■■□□□ 1.97
PTPRA-207ENST00000431048 DEFB123Q8N688 67 aa27.34■■□□□ 1.97
PTPRA-207ENST00000431048 SMC4Q9NTJ3 1288 aa27.34■■□□□ 1.97
PTPRA-207ENST00000431048 XRCC5P13010 732 aaKnown RBP27.33■■□□□ 1.97
PTPRA-207ENST00000431048 RRP1BQ14684 758 aaKnown RBP27.33■■□□□ 1.97
PTPRA-207ENST00000431048 NSUN4Q96CB9 384 aaKnown RBP27.33■■□□□ 1.97
PTPRA-207ENST00000431048 WDR18Q9BV38 432 aa27.33■■□□□ 1.97
PTPRA-207ENST00000431048 AS3MTQ9HBK9 375 aa27.33■■□□□ 1.97
PTPRA-207ENST00000431048 HERC5Q9UII4 1024 aaKnown RBP27.33■■□□□ 1.97
PTPRA-207ENST00000431048 HOXA7P31268 230 aaPredicted RBP27.32■■□□□ 1.96
PTPRA-207ENST00000431048 MAGEA10P43363 369 aaPredicted RBP27.32■■□□□ 1.96
PTPRA-207ENST00000431048 TDHQ8IZJ6 230 aa27.32■■□□□ 1.96
PTPRA-207ENST00000431048 TRIB2Q92519 343 aa27.32■■□□□ 1.96
PTPRA-207ENST00000431048 STXBP5LQ9Y2K9 1186 aa27.32■■□□□ 1.96
PTPRA-207ENST00000431048 HMG20BQ9P0W2 317 aa27.31■■□□□ 1.96
PTPRA-207ENST00000431048 TFCP2Q12800 502 aa27.3■■□□□ 1.96
PTPRA-207ENST00000431048 TRMT44Q8IYL2 757 aaKnown RBP27.3■■□□□ 1.96
PTPRA-207ENST00000431048 API5Q9BZZ5 524 aaKnown RBP27.3■■□□□ 1.96
PTPRA-207ENST00000431048 BACE1P56817 501 aa27.29■■□□□ 1.96
PTPRA-207ENST00000431048 SPATA5Q8NB90 893 aa27.29■■□□□ 1.96
PTPRA-207ENST00000431048 SOCS4Q8WXH5 440 aa27.29■■□□□ 1.96
PTPRA-207ENST00000431048 NUDT12Q9BQG2 462 aa27.29■■□□□ 1.96
PTPRA-207ENST00000431048 MTMR10Q9NXD2 777 aa27.29■■□□□ 1.96
PTPRA-207ENST00000431048 PI4KBQ9UBF8 816 aa27.29■■□□□ 1.96
PTPRA-207ENST00000431048 NOB1Q9ULX3 412 aaKnown RBP27.29■■□□□ 1.96
PTPRA-207ENST00000431048 SYN1P17600 705 aa27.28■■□□□ 1.96
PTPRA-207ENST00000431048 CYP2B6P20813 491 aa27.28■■□□□ 1.96
PTPRA-207ENST00000431048 GPRC5AQ8NFJ5 357 aa27.28■■□□□ 1.96
PTPRA-207ENST00000431048 P2RX7Q99572 595 aaKnown RBP27.28■■□□□ 1.96
PTPRA-207ENST00000431048 DHX36Q9H2U1 1008 aaKnown RBP27.28■■□□□ 1.96
PTPRA-207ENST00000431048 PLXNB2O15031 1838 aa27.27■■□□□ 1.96
PTPRA-207ENST00000431048 PFASO15067 1338 aa27.27■■□□□ 1.96
PTPRA-207ENST00000431048 CT47B1P0C2W7 299 aaPredicted RBP27.27■■□□□ 1.96
PTPRA-207ENST00000431048 COL6A1P12109 1028 aa27.27■■□□□ 1.96
PTPRA-207ENST00000431048 PRKAR2AP13861 404 aaKnown RBP27.27■■□□□ 1.96
PTPRA-207ENST00000431048 IRX3P78415 501 aaPredicted RBP27.27■■□□□ 1.96
PTPRA-207ENST00000431048 MTX1Q13505 466 aa27.27■■□□□ 1.96
PTPRA-207ENST00000431048 MEIS3Q99687 375 aa27.27■■□□□ 1.96
PTPRA-207ENST00000431048 GINM1Q9NU53 330 aa27.27■■□□□ 1.96
PTPRA-207ENST00000431048 DDX60LQ5H9U9 1706 aaKnown RBP27.27■■□□□ 1.96
PTPRA-207ENST00000431048 C19orf81C9J6K1 198 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 ASNSP08243 561 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 TBC1D9Q6ZT07 1266 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 Q7L0L9 218 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 METTL16Q86W50 562 aaKnown RBP27.26■■□□□ 1.95
PTPRA-207ENST00000431048 TEX11Q8IYF3 940 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 TRMT2AQ8IZ69 625 aaKnown RBP27.26■■□□□ 1.95
PTPRA-207ENST00000431048 USP6NLQ92738 828 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 NEUROD6Q96NK8 337 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 UBE2OQ9C0C9 1292 aaKnown RBP27.26■■□□□ 1.95
PTPRA-207ENST00000431048 TMOD4Q9NZQ9 345 aa27.26■■□□□ 1.95
PTPRA-207ENST00000431048 ARID4AP29374 1257 aaPredicted RBP27.25■■□□□ 1.95
PTPRA-207ENST00000431048 MAPK4P31152 587 aa27.25■■□□□ 1.95
PTPRA-207ENST00000431048 HERVK_113P62684 666 aa27.25■■□□□ 1.95
PTPRA-207ENST00000431048 RAI14Q9P0K7 980 aa27.25■■□□□ 1.95
PTPRA-207ENST00000431048 SRGAP3O43295 1099 aa27.24■■□□□ 1.95
PTPRA-207ENST00000431048 MTMR2Q13614 643 aa27.24■■□□□ 1.95
PTPRA-207ENST00000431048 TXNRD2Q9NNW7 524 aa27.24■■□□□ 1.95
PTPRA-207ENST00000431048 RBPJLQ9UBG7 517 aa27.24■■□□□ 1.95
PTPRA-207ENST00000431048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.24■■□□□ 1.95
PTPRA-207ENST00000431048 ATAD5Q96QE3 1844 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms