RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 ANKRD24Q8TF21 1146 aa4.94□□□□□ -1.62
HMGB1P9-201ENST00000429856 HRASLS5Q96KN8 279 aa4.94□□□□□ -1.62
HMGB1P9-201ENST00000429856 SETDB2Q96T68 719 aa4.94□□□□□ -1.62
HMGB1P9-201ENST00000429856 DUSP9Q99956 384 aaKnown RBP4.94□□□□□ -1.62
HMGB1P9-201ENST00000429856 MKNK2Q9HBH9 465 aa4.94□□□□□ -1.62
HMGB1P9-201ENST00000429856 RAPGEFL1Q9UHV5 662 aa4.94□□□□□ -1.62
HMGB1P9-201ENST00000429856 AOC2O75106 756 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 AP3B2Q13367 1082 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 ZNF423Q2M1K9 1284 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 LCNL1Q6ZST4 164 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 TTLL10Q6ZVT0 673 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 OSBPL7Q9BZF2 842 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 CEP44Q9C0F1 390 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 GPN3Q9UHW5 284 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 AK5Q9Y6K8 562 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 SYNGAP1Q96PV0 1343 aa4.93□□□□□ -1.62
HMGB1P9-201ENST00000429856 LOC105371045A0A1W2PR82 267 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 ZNF503-AS2A6NEH8 195 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 CD96P40200 585 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 AFMP43652 599 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 DAB2P98082 770 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 PSMD2Q13200 908 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 SYDE1Q6ZW31 735 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 C3orf58Q8NDZ4 430 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 BCL2L13Q9BXK5 485 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 PIDD1Q9HB75 910 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 TMEM39AQ9NV64 488 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 PARP2Q9UGN5 583 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 AKAP2Q9Y2D5 859 aa4.92□□□□□ -1.62
HMGB1P9-201ENST00000429856 CTSBP07858 339 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 USP17L7P0C7H9 530 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 SLFN14P0C7P3 912 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 BUD31P41223 144 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 FAAP100Q0VG06 881 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 CDK5R2Q13319 367 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 TMC4Q7Z404 712 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 C1QL4Q86Z23 238 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 MRS2Q9HD23 443 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 SAMM50Q9Y512 469 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 SNX11Q9Y5W9 270 aa4.91□□□□□ -1.62
HMGB1P9-201ENST00000429856 UNCXA6NJT0 531 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 NFIBO00712 420 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 SORBS3O60504 671 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 PDE3AQ14432 1141 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 MPZL3Q6UWV2 235 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 AMIGO3Q86WK7 504 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 GIPC2Q8TF65 315 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 LIN37Q96GY3 246 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 EMILIN2Q9BXX0 1053 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 LMCD1Q9NZU5 365 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 CRIM1Q9NZV1 1036 aa4.9□□□□□ -1.63
HMGB1P9-201ENST00000429856 CEACAM5P06731 702 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 OXCT1P55809 520 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 SV2BQ7L1I2 683 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 ASB11Q8WXH4 323 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 NECAB3Q96P71 396 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 TRIM56Q9BRZ2 755 aaKnown RBP4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 ATXN3LQ9H3M9 355 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 KRT82Q9NSB4 513 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 PPP1R9AQ9ULJ8 1098 aa4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 TTF2Q9UNY4 1162 aaKnown RBP4.89□□□□□ -1.63
HMGB1P9-201ENST00000429856 GSTP1P09211 210 aaKnown RBP4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 C1QTNF9P0C862 333 aa4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 NME2P22392 152 aa4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 ZNF157P51786 506 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 TPTE2Q6XPS3 522 aa4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 SULF2Q8IWU5 870 aa4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 SMYD4Q8IYR2 804 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 CRELD1Q96HD1 420 aa4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 WDR18Q9BV38 432 aa4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 PCOLCE2Q9UKZ9 415 aa4.88□□□□□ -1.63
HMGB1P9-201ENST00000429856 ECEL1O95672 775 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 GLI1P08151 1106 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 TMEM253P0C7T8 217 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 ARNTP27540 789 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 ST13P50502 369 aaKnown RBP4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 CTSWP56202 376 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 ZP2Q05996 745 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 IKZF1Q13422 519 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 LRRC14Q15048 493 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 TMEM67Q5HYA8 995 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 SCARA3Q6AZY7 606 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 PRR23BQ6ZRT6 265 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 PRDM7Q9NQW5 492 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 RNF19AQ9NV58 838 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 VTI1BQ9UEU0 232 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 PLAGL2Q9UPG8 496 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 CTNND2Q9UQB3 1225 aa4.87□□□□□ -1.63
HMGB1P9-201ENST00000429856 RBM47A0AV96 593 aaKnown RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 ENC1O14682 589 aa4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 RNGTTO60942 597 aaKnown RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 RLBP1P12271 317 aa4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 ZNF16P17020 682 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 TAGLNQ01995 201 aaKnown RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 ID3Q02535 119 aa4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 TAF1CQ15572 869 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 FBXO15Q8NCQ5 510 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 FAM161BQ96MY7 647 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms