RNA–Protein interactions for RNA: ENST00000428695.5

SATB2-203, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene SATB2, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-203ENST00000428695 ZNF654Q8IZM8 581 aa20.65■□□□□ 0.9
SATB2-203ENST00000428695 BRIP1Q9BX63 1249 aa20.65■□□□□ 0.9
SATB2-203ENST00000428695 PYCARDQ9ULZ3 195 aa20.65■□□□□ 0.9
SATB2-203ENST00000428695 A0A087WWV3 80 aa20.64■□□□□ 0.89
SATB2-203ENST00000428695 DYNLL1P63167 89 aaKnown RBP20.63■□□□□ 0.89
SATB2-203ENST00000428695 DNTTIP2Q5QJE6 756 aaKnown RBP20.63■□□□□ 0.89
SATB2-203ENST00000428695 CCDC186Q7Z3E2 898 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 NBPF11Q86T75 865 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 FNBP4Q8N3X1 1017 aaPredicted RBP20.63■□□□□ 0.89
SATB2-203ENST00000428695 ANKRD2Q9GZV1 360 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 CLIP2Q9UDT6 1046 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 SBF2Q86WG5 1849 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 KIAA1551Q9HCM1 1747 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 MMP1P03956 469 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 SLC3A2P08195 630 aaKnown RBP20.63■□□□□ 0.89
SATB2-203ENST00000428695 SEC23AQ15436 765 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 ZRSR1Q15695 479 aaKnown RBP20.63■□□□□ 0.89
SATB2-203ENST00000428695 FANCBQ8NB91 859 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 ZNF384Q8TF68 577 aa20.63■□□□□ 0.89
SATB2-203ENST00000428695 TNKSO95271 1327 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 DEXIO95424 95 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 KLRK1P26718 216 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 SAFBQ15424 915 aaKnown RBP eCLIP20.62■□□□□ 0.89
SATB2-203ENST00000428695 TPTE2Q6XPS3 522 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 NOSTRINQ8IVI9 506 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 CRACR2BQ8N4Y2 399 aaPredicted RBP20.62■□□□□ 0.89
SATB2-203ENST00000428695 MRFAP1L1Q96HT8 127 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 TIGD1Q96MW7 591 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
SATB2-203ENST00000428695 TNRC6CQ9HCJ0 1690 aaKnown RBP20.62■□□□□ 0.89
SATB2-203ENST00000428695 NUP133Q8WUM0 1156 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.62■□□□□ 0.89
SATB2-203ENST00000428695 NRBP1Q9UHY1 535 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 HPSEQ9Y251 543 aa20.62■□□□□ 0.89
SATB2-203ENST00000428695 RTCBQ9Y3I0 505 aaKnown RBP20.62■□□□□ 0.89
SATB2-203ENST00000428695 FAM237AA0A1B0GTK4 181 aa20.61■□□□□ 0.89
SATB2-203ENST00000428695 PPP2R5BQ15173 497 aa20.61■□□□□ 0.89
SATB2-203ENST00000428695 AOPEPQ8N6M6 819 aa20.61■□□□□ 0.89
SATB2-203ENST00000428695 NSUN4Q96CB9 384 aaKnown RBP20.61■□□□□ 0.89
SATB2-203ENST00000428695 UQCRHLA0A096LP55 91 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 UQCRHP07919 91 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 PCP11498 1178 aaKnown RBP20.6■□□□□ 0.89
SATB2-203ENST00000428695 HIBADHP31937 336 aaKnown RBP20.6■□□□□ 0.89
SATB2-203ENST00000428695 SYKP43405 635 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 SHC4Q6S5L8 630 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 DIS3L2Q8IYB7 885 aaKnown RBP20.6■□□□□ 0.89
SATB2-203ENST00000428695 BPIFA3Q9BQP9 254 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 CUTAO60888 179 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 RBM6P78332 1123 aaKnown RBP20.6■□□□□ 0.89
SATB2-203ENST00000428695 DPCR1Q3MIW9 517 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 RESP18Q5W5W9 173 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 FBXW7Q969H0 707 aa20.6■□□□□ 0.89
SATB2-203ENST00000428695 ZSCAN10Q96SZ4 725 aaPredicted RBP20.6■□□□□ 0.89
SATB2-203ENST00000428695 FOXP1Q9H334 677 aaPredicted RBP20.6■□□□□ 0.89
SATB2-203ENST00000428695 BTBD18B2RXH4 712 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 SMIM22K7EJ46 135 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 NLRP12P59046 1061 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 KCNJ14Q9UNX9 436 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 CYP2D7A0A087X1C5 515 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 UBAP1LF5GYI3 381 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 FGRP09769 529 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 MECOMQ03112 1051 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 CTR9Q6PD62 1173 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 CCDC82Q8N4S0 544 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 ENAHQ8N8S7 591 aaPredicted RBP20.59■□□□□ 0.89
SATB2-203ENST00000428695 TFCP2L1Q9NZI6 479 aa20.59■□□□□ 0.89
SATB2-203ENST00000428695 CMTR1Q8N1G2 835 aaKnown RBP20.58■□□□□ 0.89
SATB2-203ENST00000428695 CCDC24Q8N4L8 307 aa20.58■□□□□ 0.89
SATB2-203ENST00000428695 ARHGEF1Q92888 912 aaKnown RBP20.58■□□□□ 0.89
SATB2-203ENST00000428695 RNF26Q9BY78 433 aaPredicted RBP20.58■□□□□ 0.89
SATB2-203ENST00000428695 USP21Q9UK80 565 aa20.58■□□□□ 0.89
SATB2-203ENST00000428695 TM4SF1P30408 202 aa20.57■□□□□ 0.88
SATB2-203ENST00000428695 LRMPQ12912 555 aa20.57■□□□□ 0.88
SATB2-203ENST00000428695 RILPL1Q5EBL4 403 aa20.57■□□□□ 0.88
SATB2-203ENST00000428695 IFIT1BQ5T764 474 aaKnown RBP20.57■□□□□ 0.88
SATB2-203ENST00000428695 TMED8Q6PL24 325 aaPredicted RBP20.57■□□□□ 0.88
SATB2-203ENST00000428695 AMIGO3Q86WK7 504 aa20.57■□□□□ 0.88
SATB2-203ENST00000428695 IQCA1Q86XH1 822 aa20.57■□□□□ 0.88
SATB2-203ENST00000428695 KRI1Q8N9T8 703 aaKnown RBP20.57■□□□□ 0.88
SATB2-203ENST00000428695 CLIC6Q96NY7 704 aa20.57■□□□□ 0.88
SATB2-203ENST00000428695 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
SATB2-203ENST00000428695 TOB1P50616 345 aaPredicted RBP20.56■□□□□ 0.88
SATB2-203ENST00000428695 CHAF1AQ13111 956 aaPredicted RBP20.56■□□□□ 0.88
SATB2-203ENST00000428695 CCDC144BQ3MJ40 725 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 CATIPQ7Z7H3 387 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 PRIMPOLQ96LW4 560 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 USP17L12C9JPN9 530 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 USP17L21D6R901 530 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 BIN1O00499 593 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 ZBTB22O15209 634 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 FAM182BQ5T319 152 aa20.56■□□□□ 0.88
SATB2-203ENST00000428695 AATFQ9NY61 560 aaKnown RBP eCLIP20.56■□□□□ 0.88
SATB2-203ENST00000428695 PRDM1O75626 825 aa20.55■□□□□ 0.88
SATB2-203ENST00000428695 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
SATB2-203ENST00000428695 RBM28Q9NW13 759 aaKnown RBP20.55■□□□□ 0.88
SATB2-203ENST00000428695 TUBE1Q9UJT0 475 aa20.55■□□□□ 0.88
SATB2-203ENST00000428695 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.55■□□□□ 0.88
SATB2-203ENST00000428695 NPHP1O15259 732 aa20.54■□□□□ 0.88
SATB2-203ENST00000428695 CALM1P0DP23 149 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms