RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 HSPA1BP0DMV9 641 aaKnown RBP28.26■■■□□ 2.11
PDGFA-205ENST00000426681 SLURP2P0DP57 97 aa28.26■■■□□ 2.11
PDGFA-205ENST00000426681 GJA5P36382 358 aa28.26■■■□□ 2.11
PDGFA-205ENST00000426681 ERO1BQ86YB8 467 aa28.26■■■□□ 2.11
PDGFA-205ENST00000426681 SDR42E1Q8WUS8 393 aa28.26■■■□□ 2.11
PDGFA-205ENST00000426681 STRBPQ96SI9 672 aaKnown RBP28.26■■■□□ 2.11
PDGFA-205ENST00000426681 DCP1AQ9NPI6 582 aaPredicted RBP28.26■■■□□ 2.11
PDGFA-205ENST00000426681 DDX60LQ5H9U9 1706 aaKnown RBP28.26■■■□□ 2.11
PDGFA-205ENST00000426681 PRKAB2O43741 272 aa28.25■■■□□ 2.11
PDGFA-205ENST00000426681 CTNND1O60716 968 aaKnown RBP28.25■■■□□ 2.11
PDGFA-205ENST00000426681 MKRN3Q13064 507 aaKnown RBP28.25■■■□□ 2.11
PDGFA-205ENST00000426681 ZMYM1Q5SVZ6 1142 aa28.25■■■□□ 2.11
PDGFA-205ENST00000426681 CENPQQ7L2Z9 268 aaPredicted RBP28.25■■■□□ 2.11
PDGFA-205ENST00000426681 TTC6Q86TZ1 520 aa28.25■■■□□ 2.11
PDGFA-205ENST00000426681 EHD4Q9H223 541 aa28.25■■■□□ 2.11
PDGFA-205ENST00000426681 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.25■■■□□ 2.11
PDGFA-205ENST00000426681 NAV1Q8NEY1 1877 aa28.25■■■□□ 2.11
PDGFA-205ENST00000426681 TM4SF4P48230 202 aa28.24■■■□□ 2.11
PDGFA-205ENST00000426681 MANSC4A6NHS7 340 aaPredicted RBP28.23■■■□□ 2.11
PDGFA-205ENST00000426681 FAM196BA6NMK8 535 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 TRIM6-TRIM34B2RNG4 842 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 INHBEP58166 350 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 SCYL3Q8IZE3 742 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 CNKSR2Q8WXI2 1034 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 BEGAINQ9BUH8 593 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 MCM9Q9NXL9 1143 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 SLC4A4Q9Y6R1 1079 aa28.23■■■□□ 2.11
PDGFA-205ENST00000426681 M0R2C6 588 aa28.22■■■□□ 2.11
PDGFA-205ENST00000426681 PPATQ06203 517 aa28.22■■■□□ 2.11
PDGFA-205ENST00000426681 SREBF2Q12772 1141 aa28.22■■■□□ 2.11
PDGFA-205ENST00000426681 CRACR2BQ8N4Y2 399 aaPredicted RBP28.22■■■□□ 2.11
PDGFA-205ENST00000426681 DNAJC18Q9H819 358 aa28.22■■■□□ 2.11
PDGFA-205ENST00000426681 GPAA1O43292 621 aa28.21■■■□□ 2.11
PDGFA-205ENST00000426681 CA12O43570 354 aa28.21■■■□□ 2.11
PDGFA-205ENST00000426681 POLR3DP05423 398 aaPredicted RBP28.21■■■□□ 2.11
PDGFA-205ENST00000426681 PPIL2Q13356 520 aa28.21■■■□□ 2.11
PDGFA-205ENST00000426681 OTUD5Q96G74 571 aa28.21■■■□□ 2.11
PDGFA-205ENST00000426681 SERPINB13Q9UIV8 391 aa28.21■■■□□ 2.11
PDGFA-205ENST00000426681 GNAT2P19087 354 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 PLCD1P51178 756 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 GIMAP6Q6P9H5 292 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 RILPL2Q969X0 211 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 DDRGK1Q96HY6 314 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 MS4A4AQ96JQ5 239 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 SEC62Q99442 399 aaKnown RBP28.2■■■□□ 2.1
PDGFA-205ENST00000426681 TRIM34Q9BYJ4 488 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 PICK1Q9NRD5 415 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 TAOK2Q9UL54 1235 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 DOCK1Q14185 1865 aa28.2■■■□□ 2.1
PDGFA-205ENST00000426681 TESPA1A2RU30 521 aaPredicted RBP28.19■■■□□ 2.1
PDGFA-205ENST00000426681 CAP2P40123 477 aa28.19■■■□□ 2.1
PDGFA-205ENST00000426681 RRP1BQ14684 758 aaKnown RBP28.19■■■□□ 2.1
PDGFA-205ENST00000426681 SLC4A8Q2Y0W8 1093 aa28.19■■■□□ 2.1
PDGFA-205ENST00000426681 BAZ2AQ9UIF9 1905 aaKnown RBP28.18■■■□□ 2.1
PDGFA-205ENST00000426681 GSG1L2A8MUP6 293 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 IRF6O14896 467 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 FOXN1O15353 648 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 PTPRAP18433 802 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 GTF2A2P52657 109 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 ERICH6BQ5W0A0 696 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 CCDC136Q96JN2 1154 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 HELLSQ9NRZ9 838 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 SAGE1Q9NXZ1 904 aa28.18■■■□□ 2.1
PDGFA-205ENST00000426681 GABPAQ06546 454 aa28.17■■■□□ 2.1
PDGFA-205ENST00000426681 TTC22Q5TAA0 569 aa28.17■■■□□ 2.1
PDGFA-205ENST00000426681 TATDN1Q6P1N9 297 aa28.17■■■□□ 2.1
PDGFA-205ENST00000426681 RNF186Q9NXI6 227 aa28.17■■■□□ 2.1
PDGFA-205ENST00000426681 C12orf60Q5U649 245 aa28.16■■■□□ 2.1
PDGFA-205ENST00000426681 GINM1Q9NU53 330 aa28.16■■■□□ 2.1
PDGFA-205ENST00000426681 KCNH4Q9UQ05 1017 aa28.16■■■□□ 2.1
PDGFA-205ENST00000426681 PATL2C9JE40 543 aaKnown RBP28.15■■■□□ 2.1
PDGFA-205ENST00000426681 USP17L12C9JPN9 530 aa28.15■■■□□ 2.1
PDGFA-205ENST00000426681 USP17L21D6R901 530 aa28.15■■■□□ 2.1
PDGFA-205ENST00000426681 SDSP20132 328 aa28.15■■■□□ 2.1
PDGFA-205ENST00000426681 CTCFP49711 727 aaPredicted RBP28.15■■■□□ 2.1
PDGFA-205ENST00000426681 SNAPC2Q13487 334 aa28.15■■■□□ 2.1
PDGFA-205ENST00000426681 AMOTL1Q8IY63 956 aa28.15■■■□□ 2.1
PDGFA-205ENST00000426681 ZHX2Q9Y6X8 837 aa28.15■■■□□ 2.1
PDGFA-205ENST00000426681 ATAD5Q96QE3 1844 aa28.15■■■□□ 2.1
PDGFA-205ENST00000426681 CYP2D6P10635 497 aa28.14■■■□□ 2.1
PDGFA-205ENST00000426681 SBK1Q52WX2 424 aa28.14■■■□□ 2.1
PDGFA-205ENST00000426681 CTR9Q6PD62 1173 aa28.14■■■□□ 2.1
PDGFA-205ENST00000426681 IFNL1Q8IU54 200 aa28.14■■■□□ 2.1
PDGFA-205ENST00000426681 ARPP21Q9UBL0 812 aaPredicted RBP28.14■■■□□ 2.1
PDGFA-205ENST00000426681 PHIPQ8WWQ0 1821 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 CXCL11O14625 94 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 CETPP11597 493 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 GSPT1P15170 499 aaKnown RBP28.13■■■□□ 2.09
PDGFA-205ENST00000426681 EVX2Q03828 476 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 MCMDC2Q4G0Z9 681 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 BRI3BPQ8WY22 251 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 FAM227BQ96M60 508 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 AFG3L2Q9Y4W6 797 aa28.13■■■□□ 2.09
PDGFA-205ENST00000426681 A0A0D9SFI3 127 aa28.12■■■□□ 2.09
PDGFA-205ENST00000426681 TRPA1O75762 1119 aa28.12■■■□□ 2.09
PDGFA-205ENST00000426681 ALDH1A1P00352 501 aa28.12■■■□□ 2.09
PDGFA-205ENST00000426681 ASNSP08243 561 aa28.12■■■□□ 2.09
PDGFA-205ENST00000426681 SHMT1P34896 483 aa28.12■■■□□ 2.09
PDGFA-205ENST00000426681 NMIQ13287 307 aaPredicted RBP28.12■■■□□ 2.09
PDGFA-205ENST00000426681 PTPN18Q99952 460 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms