RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 MAPKAPK5Q8IW41 473 aa31.11■■■□□ 2.57
SMDT1-202ENST00000422252 CLASRPQ8N2M8 674 aaKnown RBP31.11■■■□□ 2.57
SMDT1-202ENST00000422252 ARHGAP39Q9C0H5 1083 aa31.11■■■□□ 2.57
SMDT1-202ENST00000422252 PI4KBQ9UBF8 816 aa31.11■■■□□ 2.57
SMDT1-202ENST00000422252 FLT1P17948 1338 aa31.1■■■□□ 2.57
SMDT1-202ENST00000422252 APBB1O00213 710 aa31.1■■■□□ 2.57
SMDT1-202ENST00000422252 PDE3AQ14432 1141 aa31.1■■■□□ 2.57
SMDT1-202ENST00000422252 ANTXR1Q9H6X2 564 aa31.1■■■□□ 2.57
SMDT1-202ENST00000422252 TRIM75PA6NK02 468 aa31.09■■■□□ 2.57
SMDT1-202ENST00000422252 GADL1Q6ZQY3 521 aa31.09■■■□□ 2.57
SMDT1-202ENST00000422252 CCDC84Q86UT8 332 aaPredicted RBP31.09■■■□□ 2.57
SMDT1-202ENST00000422252 MAGEB6Q8N7X4 407 aa31.09■■■□□ 2.57
SMDT1-202ENST00000422252 ARMC5Q96C12 935 aa31.09■■■□□ 2.57
SMDT1-202ENST00000422252 PHIPQ8WWQ0 1821 aa31.09■■■□□ 2.57
SMDT1-202ENST00000422252 RAB11FIP3O75154 756 aa31.08■■■□□ 2.57
SMDT1-202ENST00000422252 GNRH1P01148 92 aa31.08■■■□□ 2.57
SMDT1-202ENST00000422252 CAP2P40123 477 aa31.08■■■□□ 2.57
SMDT1-202ENST00000422252 DYNLL1P63167 89 aaKnown RBP31.08■■■□□ 2.57
SMDT1-202ENST00000422252 MAP3K12Q12852 859 aa31.08■■■□□ 2.57
SMDT1-202ENST00000422252 C20orf194Q5TEA3 1177 aa31.08■■■□□ 2.57
SMDT1-202ENST00000422252 TMED8Q6PL24 325 aaPredicted RBP31.08■■■□□ 2.57
SMDT1-202ENST00000422252 PTCH2Q9Y6C5 1203 aa31.08■■■□□ 2.57
SMDT1-202ENST00000422252 CYP2C8P10632 490 aa31.07■■■□□ 2.56
SMDT1-202ENST00000422252 CERS3Q8IU89 383 aa31.07■■■□□ 2.56
SMDT1-202ENST00000422252 SLC45A1Q9Y2W3 748 aa31.07■■■□□ 2.56
SMDT1-202ENST00000422252 CDK5RAP2Q96SN8 1893 aa31.07■■■□□ 2.56
SMDT1-202ENST00000422252 FOCADQ5VW36 1801 aa31.07■■■□□ 2.56
SMDT1-202ENST00000422252 TNRC18O15417 2968 aaPredicted RBP31.06■■■□□ 2.56
SMDT1-202ENST00000422252 IFIT2P09913 472 aaKnown RBP31.06■■■□□ 2.56
SMDT1-202ENST00000422252 RRP1BQ14684 758 aaKnown RBP31.06■■■□□ 2.56
SMDT1-202ENST00000422252 MIGA1Q8NAN2 632 aa31.06■■■□□ 2.56
SMDT1-202ENST00000422252 TBC1D2Q9BYX2 928 aa31.06■■■□□ 2.56
SMDT1-202ENST00000422252 PTPRFP10586 1907 aa31.06■■■□□ 2.56
SMDT1-202ENST00000422252 ZSWIM8A7E2V4 1837 aa31.05■■■□□ 2.56
SMDT1-202ENST00000422252 PALD1Q9ULE6 856 aa31.05■■■□□ 2.56
SMDT1-202ENST00000422252 SIPA1L1O43166 1804 aa31.05■■■□□ 2.56
SMDT1-202ENST00000422252 TTF1Q15361 905 aaPredicted RBP31.04■■■□□ 2.56
SMDT1-202ENST00000422252 SLC9C1Q4G0N8 1177 aa31.04■■■□□ 2.56
SMDT1-202ENST00000422252 METTL16Q86W50 562 aaKnown RBP31.04■■■□□ 2.56
SMDT1-202ENST00000422252 FOXP4Q8IVH2 680 aaPredicted RBP31.04■■■□□ 2.56
SMDT1-202ENST00000422252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.04■■■□□ 2.56
SMDT1-202ENST00000422252 ECM2O94769 699 aaPredicted RBP31.03■■■□□ 2.56
SMDT1-202ENST00000422252 BCRP11274 1271 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 PSMC4P43686 418 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 PRMT2P55345 433 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 NBPF11Q86T75 865 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 CRACR2BQ8N4Y2 399 aaPredicted RBP31.03■■■□□ 2.56
SMDT1-202ENST00000422252 ZNF280CQ8ND82 737 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 TRIM34Q9BYJ4 488 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 SAP30BPQ9UHR5 308 aaKnown RBP31.03■■■□□ 2.56
SMDT1-202ENST00000422252 AGTPBP1Q9UPW5 1226 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 ATAD5Q96QE3 1844 aa31.03■■■□□ 2.56
SMDT1-202ENST00000422252 USP17L5A8MUK1 530 aa31.02■■■□□ 2.56
SMDT1-202ENST00000422252 CTGFP29279 349 aa31.02■■■□□ 2.56
SMDT1-202ENST00000422252 SPP2Q13103 211 aa31.02■■■□□ 2.56
SMDT1-202ENST00000422252 ZNF333Q96JL9 665 aa31.02■■■□□ 2.56
SMDT1-202ENST00000422252 TRIM47Q96LD4 638 aa31.02■■■□□ 2.56
SMDT1-202ENST00000422252 BCL11AQ9H165 835 aa31.02■■■□□ 2.56
SMDT1-202ENST00000422252 DNAJC18Q9H819 358 aa31.02■■■□□ 2.56
SMDT1-202ENST00000422252 HLA-DOAP06340 250 aa31.01■■■□□ 2.55
SMDT1-202ENST00000422252 USP5P45974 858 aa31.01■■■□□ 2.55
SMDT1-202ENST00000422252 PROCA1Q8NCQ7 364 aaPredicted RBP31.01■■■□□ 2.55
SMDT1-202ENST00000422252 CENPFP49454 3210 aa31.01■■■□□ 2.55
SMDT1-202ENST00000422252 POTEFA5A3E0 1075 aa31■■■□□ 2.55
SMDT1-202ENST00000422252 FMNL1O95466 1100 aaPredicted RBP31■■■□□ 2.55
SMDT1-202ENST00000422252 AS3MTQ9HBK9 375 aa31■■■□□ 2.55
SMDT1-202ENST00000422252 HOXD10P28358 340 aa30.99■■■□□ 2.55
SMDT1-202ENST00000422252 TREML2Q5T2D2 321 aa30.99■■■□□ 2.55
SMDT1-202ENST00000422252 DNAJC2Q99543 621 aaKnown RBP30.99■■■□□ 2.55
SMDT1-202ENST00000422252 SRRDQ9UH36 339 aa30.99■■■□□ 2.55
SMDT1-202ENST00000422252 ASNSP08243 561 aa30.98■■■□□ 2.55
SMDT1-202ENST00000422252 OSBPP22059 807 aa30.98■■■□□ 2.55
SMDT1-202ENST00000422252 SLC4A8Q2Y0W8 1093 aa30.98■■■□□ 2.55
SMDT1-202ENST00000422252 SMCR8Q8TEV9 937 aaPredicted RBP30.98■■■□□ 2.55
SMDT1-202ENST00000422252 GOLIM4O00461 696 aa30.97■■■□□ 2.55
SMDT1-202ENST00000422252 HMGCS2P54868 508 aa30.97■■■□□ 2.55
SMDT1-202ENST00000422252 SLC9C2Q5TAH2 1124 aa30.97■■■□□ 2.55
SMDT1-202ENST00000422252 RIOK1Q9BRS2 568 aaKnown RBP30.97■■■□□ 2.55
SMDT1-202ENST00000422252 TMEM106CQ9BVX2 250 aa30.97■■■□□ 2.55
SMDT1-202ENST00000422252 GINM1Q9NU53 330 aa30.97■■■□□ 2.55
SMDT1-202ENST00000422252 PNMA3Q9UL41 463 aa30.97■■■□□ 2.55
SMDT1-202ENST00000422252 PDE6AP16499 860 aa30.96■■■□□ 2.55
SMDT1-202ENST00000422252 FCGRTP55899 365 aa30.96■■■□□ 2.55
SMDT1-202ENST00000422252 SH3D19Q5HYK7 790 aa30.96■■■□□ 2.55
SMDT1-202ENST00000422252 WDR18Q9BV38 432 aa30.96■■■□□ 2.55
SMDT1-202ENST00000422252 RBBP6Q7Z6E9 1792 aaKnown RBP30.96■■■□□ 2.55
SMDT1-202ENST00000422252 LOC285556D6RIA3 1793 aa30.95■■■□□ 2.55
SMDT1-202ENST00000422252 MAGEB6P1A0A0J9YX57 407 aa30.95■■■□□ 2.55
SMDT1-202ENST00000422252 GDF11O95390 407 aa30.95■■■□□ 2.55
SMDT1-202ENST00000422252 JAG1P78504 1218 aa30.95■■■□□ 2.55
SMDT1-202ENST00000422252 SH3TC2Q8TF17 1288 aa30.95■■■□□ 2.55
SMDT1-202ENST00000422252 MYH1P12882 1939 aa30.94■■■□□ 2.54
SMDT1-202ENST00000422252 PABPC4Q13310 644 aaKnown RBP eCLIP30.94■■■□□ 2.546e-7■■□□□ 13.6
SMDT1-202ENST00000422252 LRRCC1Q9C099 1032 aa30.94■■■□□ 2.54
SMDT1-202ENST00000422252 MYPNQ86TC9 1320 aa30.94■■■□□ 2.54
SMDT1-202ENST00000422252 ATP5JP18859 108 aa30.93■■■□□ 2.54
SMDT1-202ENST00000422252 RAET1EQ8TD07 263 aa30.93■■■□□ 2.54
SMDT1-202ENST00000422252 EHD4Q9H223 541 aa30.93■■■□□ 2.54
SMDT1-202ENST00000422252 BOLA2Q9H3K6 86 aa30.93■■■□□ 2.54
SMDT1-202ENST00000422252 ZBTB21Q9ULJ3 1066 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms