RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 FAM237AA0A1B0GTK4 181 aa18.71■□□□□ 0.59
CTSB-203ENST00000420692 GOLGA6L19H0YKK7 550 aa18.71■□□□□ 0.59
CTSB-203ENST00000420692 GNPATO15228 680 aa18.71■□□□□ 0.59
CTSB-203ENST00000420692 MMP1P03956 469 aa18.71■□□□□ 0.59
CTSB-203ENST00000420692 DRC7Q8IY82 874 aa18.71■□□□□ 0.59
CTSB-203ENST00000420692 FNBP4Q8N3X1 1017 aaPredicted RBP18.71■□□□□ 0.59
CTSB-203ENST00000420692 NSUN4Q96CB9 384 aaKnown RBP18.71■□□□□ 0.59
CTSB-203ENST00000420692 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.71■□□□□ 0.59
CTSB-203ENST00000420692 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
CTSB-203ENST00000420692 UQCRHLA0A096LP55 91 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 UQCRHP07919 91 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 SART3Q15020 963 aaKnown RBP18.7■□□□□ 0.58
CTSB-203ENST00000420692 TXNRD3Q86VQ6 643 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 NBPF5PQ86XG9 351 aaPredicted RBP18.7■□□□□ 0.58
CTSB-203ENST00000420692 CACTINQ8WUQ7 758 aaKnown RBP18.7■□□□□ 0.58
CTSB-203ENST00000420692 DUOX1Q9NRD9 1551 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 CLIP2Q9UDT6 1046 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 MYH13Q9UKX3 1938 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 TNKSO95271 1327 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 IRS2Q9Y4H2 1338 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 SLC3A2P08195 630 aaKnown RBP18.7■□□□□ 0.58
CTSB-203ENST00000420692 FGRP09769 529 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 TRIM29Q14134 588 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 RESP18Q5W5W9 173 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 NOSTRINQ8IVI9 506 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 CEP57L1Q8IYX8 460 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 TMTC2Q8N394 836 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 ENAHQ8N8S7 591 aaPredicted RBP18.7■□□□□ 0.58
CTSB-203ENST00000420692 MRFAP1L1Q96HT8 127 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 NLRP3Q96P20 1036 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 BRIP1Q9BX63 1249 aa18.7■□□□□ 0.58
CTSB-203ENST00000420692 MYH6P13533 1939 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 MECOMQ03112 1051 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 GNL2Q13823 731 aaKnown RBP18.69■□□□□ 0.58
CTSB-203ENST00000420692 CTR9Q6PD62 1173 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 ARHGEF1Q92888 912 aaKnown RBP18.69■□□□□ 0.58
CTSB-203ENST00000420692 NYXQ9GZU5 481 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 BECN2A8MW95 431 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 BIN1O00499 593 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 PRDM1O75626 825 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 RCAN1P53805 252 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 FUT2Q10981 343 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 ARID5BQ14865 1188 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 DIS3L2Q8IYB7 885 aaKnown RBP18.69■□□□□ 0.58
CTSB-203ENST00000420692 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 ESR2Q92731 530 aa18.69■□□□□ 0.58
CTSB-203ENST00000420692 ERICH2A1L162 156 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 OXER1Q8TDS5 423 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 TIGD1Q96MW7 591 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 UBAC1Q9BSL1 405 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 TNRC6CQ9HCJ0 1690 aaKnown RBP18.68■□□□□ 0.58
CTSB-203ENST00000420692 TAF1LQ8IZX4 1826 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 SYKP43405 635 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 NLRP12P59046 1061 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 RBM6P78332 1123 aaKnown RBP18.68■□□□□ 0.58
CTSB-203ENST00000420692 GRIN1Q05586 938 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 NR5A1Q13285 461 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 WASF1Q92558 559 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 ZSCAN10Q96SZ4 725 aaPredicted RBP18.68■□□□□ 0.58
CTSB-203ENST00000420692 BPIFA3Q9BQP9 254 aa18.68■□□□□ 0.58
CTSB-203ENST00000420692 CCNL1Q9UK58 526 aaPredicted RBP18.68■□□□□ 0.58
CTSB-203ENST00000420692 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 USP17L21D6R901 530 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 SEMA3EO15041 775 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 ZPR1O75312 459 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 DEXIO95424 95 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 HIBADHP31937 336 aaKnown RBP18.67■□□□□ 0.58
CTSB-203ENST00000420692 NCAPHQ15003 741 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 DNTTIP2Q5QJE6 756 aaKnown RBP18.67■□□□□ 0.58
CTSB-203ENST00000420692 TUBE1Q9UJT0 475 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 THSD7AQ9UPZ6 1657 aa18.67■□□□□ 0.58
CTSB-203ENST00000420692 PRDX5P30044 214 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 PKN1Q16512 942 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 TRIM22Q8IYM9 498 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
CTSB-203ENST00000420692 DLEC1Q9Y238 1755 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 PDS5AQ29RF7 1337 aaKnown RBP18.66■□□□□ 0.58
CTSB-203ENST00000420692 CUTAO60888 179 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 LONRF3Q496Y0 759 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 TPTE2Q6XPS3 522 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 FOXP4Q8IVH2 680 aaPredicted RBP18.66■□□□□ 0.58
CTSB-203ENST00000420692 JMYQ8N9B5 988 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 NAT10Q9H0A0 1025 aaKnown RBP18.66■□□□□ 0.58
CTSB-203ENST00000420692 FOXP1Q9H334 677 aaPredicted RBP18.66■□□□□ 0.58
CTSB-203ENST00000420692 JAG2Q9Y219 1238 aa18.66■□□□□ 0.58
CTSB-203ENST00000420692 CCDC196A0A1B0GTZ2 297 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 ISM2Q6H9L7 571 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 ANKRD2Q9GZV1 360 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 HSD3B7Q9H2F3 369 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.58
CTSB-203ENST00000420692 RTCBQ9Y3I0 505 aaKnown RBP18.65■□□□□ 0.58
CTSB-203ENST00000420692 TROAPQ12815 778 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 PNOCQ13519 176 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 SPECC1Q5M775 1068 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 METTL16Q86W50 562 aaKnown RBP18.65■□□□□ 0.58
CTSB-203ENST00000420692 DCP1AQ9NPI6 582 aaPredicted RBP18.65■□□□□ 0.58
CTSB-203ENST00000420692 FBXO2Q9UK22 296 aaPredicted RBP18.65■□□□□ 0.58
CTSB-203ENST00000420692 PCDHB6Q9Y5E3 794 aa18.65■□□□□ 0.58
CTSB-203ENST00000420692 hCG_1642624A0A1W2PR95 340 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms