RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 MIGA1Q8NAN2 632 aa17.71■□□□□ 0.43
SEC24D-202ENST00000419654 MRPS27Q92552 414 aaKnown RBP17.71■□□□□ 0.43
SEC24D-202ENST00000419654 TRMT1Q9NXH9 659 aaKnown RBP17.71■□□□□ 0.43
SEC24D-202ENST00000419654 EVCP57679 992 aa17.71■□□□□ 0.43
SEC24D-202ENST00000419654 BRIP1Q9BX63 1249 aa17.71■□□□□ 0.43
SEC24D-202ENST00000419654 TIAM2Q8IVF5 1701 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 PRKAB2O43741 272 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 TPD52L1Q16890 204 aaPredicted RBP17.7■□□□□ 0.42
SEC24D-202ENST00000419654 DPCR1Q3MIW9 517 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 MYH15Q9Y2K3 1946 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 MAST2Q6P0Q8 1798 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 FMR1NBQ8N0W7 255 aaPredicted RBP17.7■□□□□ 0.42
SEC24D-202ENST00000419654 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
SEC24D-202ENST00000419654 RIOK1Q9BRS2 568 aaKnown RBP17.7■□□□□ 0.42
SEC24D-202ENST00000419654 NAPBQ9H115 298 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 SLC4A4Q9Y6R1 1079 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 CHD4Q14839 1912 aa17.7■□□□□ 0.42
SEC24D-202ENST00000419654 TNNT1P13805 278 aa17.69■□□□□ 0.42
SEC24D-202ENST00000419654 PTPN21Q16825 1174 aa17.69■□□□□ 0.42
SEC24D-202ENST00000419654 CCDC82Q8N4S0 544 aa17.69■□□□□ 0.42
SEC24D-202ENST00000419654 FBXO18Q8NFZ0 1043 aa17.69■□□□□ 0.42
SEC24D-202ENST00000419654 PODXL2Q9NZ53 605 aa17.69■□□□□ 0.42
SEC24D-202ENST00000419654 LTBP1Q14766 1721 aa17.69■□□□□ 0.42
SEC24D-202ENST00000419654 MAGEB6P1A0A0J9YX57 407 aa17.69■□□□□ 0.42
SEC24D-202ENST00000419654 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
SEC24D-202ENST00000419654 SPTLC2O15270 562 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 ATP2B4P23634 1241 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 MYSM1Q5VVJ2 828 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 SYNE3Q6ZMZ3 975 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 CDC27P30260 824 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 TRDNQ13061 729 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 TMC4Q7Z404 712 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 RTEL1Q9NZ71 1219 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 KIAA1551Q9HCM1 1747 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 MMP10P09238 476 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 MECOMQ03112 1051 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 NFXL1Q6ZNB6 911 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 ZNF804AQ7Z570 1209 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 ZKSCAN3Q9BRR0 538 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
SEC24D-202ENST00000419654 CTAGE5O15320 804 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 RRP12Q5JTH9 1297 aaKnown RBP17.67■□□□□ 0.42
SEC24D-202ENST00000419654 ADALQ6DHV7 355 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 LRRC8AQ8IWT6 810 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 GGA1Q9UJY5 639 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 IGSF3O75054 1194 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 WDHD1O75717 1129 aaPredicted RBP17.67■□□□□ 0.42
SEC24D-202ENST00000419654 SRGNP10124 158 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
SEC24D-202ENST00000419654 ZRSR1Q15695 479 aaKnown RBP17.67■□□□□ 0.42
SEC24D-202ENST00000419654 CEP57L1Q8IYX8 460 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
SEC24D-202ENST00000419654 ALG1Q9BT22 464 aa17.67■□□□□ 0.42
SEC24D-202ENST00000419654 NEDD4P46934 1319 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 UFL1O94874 794 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 PRDX5P30044 214 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 METAP2P50579 478 aaKnown RBP eCLIP17.66■□□□□ 0.42
SEC24D-202ENST00000419654 CBX1P83916 185 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 SPECC1Q5M775 1068 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 MAP7D2Q96T17 732 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 PARP3Q9Y6F1 533 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 MROH7-TTC4A0A0A0MT08 1334 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 SMC2O95347 1197 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 TDO2P48775 406 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 KIF23Q02241 960 aaPredicted RBP17.66■□□□□ 0.42
SEC24D-202ENST00000419654 PPP4R3BQ5MIZ7 849 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 WDR66Q8TBY9 1149 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 CLIC6Q96NY7 704 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 GPR101Q96P66 508 aaPredicted RBP17.66■□□□□ 0.42
SEC24D-202ENST00000419654 TACC3Q9Y6A5 838 aa17.66■□□□□ 0.42
SEC24D-202ENST00000419654 COL11A2P13942 1736 aaPredicted RBP17.66■□□□□ 0.42
SEC24D-202ENST00000419654 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 DHX16O60231 1041 aaKnown RBP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 ZNF202O95125 648 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 SKILP12757 684 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 QSER1Q2KHR3 1735 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 PPEF1O14829 653 aaPredicted RBP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 NPR1P16066 1061 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 DYNLL1P63167 89 aaKnown RBP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 ANO1Q5XXA6 986 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 STAG1Q8WVM7 1258 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 POLLQ9UGP5 575 aa17.65■□□□□ 0.42
SEC24D-202ENST00000419654 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 V9GYY5 206 aaPredicted RBP17.65■□□□□ 0.42
SEC24D-202ENST00000419654 PFKFB1P16118 471 aa17.64■□□□□ 0.41
SEC24D-202ENST00000419654 GTF2F1P35269 517 aaKnown RBP eCLIP17.64■□□□□ 0.41
SEC24D-202ENST00000419654 HSP90AA4PQ58FG1 418 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms