RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 PRRT2Q7Z6L0 340 aaPredicted RBP11.55□□□□□ -0.56
NUP50-205ENST00000419387 NBPF11Q86T75 865 aa11.55□□□□□ -0.56
NUP50-205ENST00000419387 SH3RF3Q8TEJ3 882 aaPredicted RBP11.55□□□□□ -0.56
NUP50-205ENST00000419387 EAF2Q96CJ1 260 aaPredicted RBP11.55□□□□□ -0.56
NUP50-205ENST00000419387 ARHGAP39Q9C0H5 1083 aa11.55□□□□□ -0.56
NUP50-205ENST00000419387 AATFQ9NY61 560 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUP50-205ENST00000419387 DBNLQ9UJU6 430 aaKnown RBP11.55□□□□□ -0.56
NUP50-205ENST00000419387 PTCH2Q9Y6C5 1203 aa11.55□□□□□ -0.56
NUP50-205ENST00000419387 DOCK2Q92608 1830 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 POTEFA5A3E0 1075 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 PLCG2P16885 1265 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 PSMC4P43686 418 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 PRMT2P55345 433 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 SLC9C1Q4G0N8 1177 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 GADL1Q6ZQY3 521 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 ERC1Q8IUD2 1116 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
NUP50-205ENST00000419387 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 DHX36Q9H2U1 1008 aaKnown RBP11.54□□□□□ -0.56
NUP50-205ENST00000419387 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
NUP50-205ENST00000419387 ADGRA2Q96PE1 1338 aa11.54□□□□□ -0.56
NUP50-205ENST00000419387 COL2A1P02458 1487 aaPredicted RBP11.53□□□□□ -0.56
NUP50-205ENST00000419387 TRIM75PA6NK02 468 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
NUP50-205ENST00000419387 CYP2C8P10632 490 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 HOXD10P28358 340 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 CTGFP29279 349 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 CAP2P40123 477 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 HSP90AB4PQ58FF6 505 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 ADGRA1Q86SQ6 560 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 TGFBRAP1Q8WUH2 860 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 PIH1D3Q9NQM4 214 aaKnown RBP11.53□□□□□ -0.56
NUP50-205ENST00000419387 PI4KBQ9UBF8 816 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
NUP50-205ENST00000419387 EXOC6BQ9Y2D4 811 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 SLC45A1Q9Y2W3 748 aa11.53□□□□□ -0.56
NUP50-205ENST00000419387 SPDYE4A6NLX3 237 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
NUP50-205ENST00000419387 BCRP11274 1271 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 CYP7A1P22680 504 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
NUP50-205ENST00000419387 AACSQ86V21 672 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 FOXP4Q8IVH2 680 aaPredicted RBP11.52□□□□□ -0.57
NUP50-205ENST00000419387 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 RPAP2Q8IXW5 612 aaPredicted RBP11.52□□□□□ -0.57
NUP50-205ENST00000419387 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.52□□□□□ -0.57
NUP50-205ENST00000419387 SRRDQ9UH36 339 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 DDX19BQ9UMR2 479 aa11.52□□□□□ -0.57
NUP50-205ENST00000419387 USP17L5A8MUK1 530 aa11.51□□□□□ -0.57
NUP50-205ENST00000419387 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
NUP50-205ENST00000419387 EN2P19622 333 aaPredicted RBP11.51□□□□□ -0.57
NUP50-205ENST00000419387 OSBPP22059 807 aa11.51□□□□□ -0.57
NUP50-205ENST00000419387 DYNLL1P63167 89 aaKnown RBP11.51□□□□□ -0.57
NUP50-205ENST00000419387 SPP2Q13103 211 aa11.51□□□□□ -0.57
NUP50-205ENST00000419387 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
NUP50-205ENST00000419387 RHPN1Q8TCX5 695 aa11.51□□□□□ -0.57
NUP50-205ENST00000419387 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
NUP50-205ENST00000419387 ZBTB40Q9NUA8 1239 aa11.51□□□□□ -0.57
NUP50-205ENST00000419387 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
NUP50-205ENST00000419387 HMMRO75330 724 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 MAP3K12Q12852 859 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 PRPF38BQ5VTL8 546 aaKnown RBP11.5□□□□□ -0.57
NUP50-205ENST00000419387 TMED8Q6PL24 325 aaPredicted RBP11.5□□□□□ -0.57
NUP50-205ENST00000419387 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
NUP50-205ENST00000419387 CERS3Q8IU89 383 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
NUP50-205ENST00000419387 ZNF280CQ8ND82 737 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
NUP50-205ENST00000419387 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 IL1RAPL2Q9NP60 686 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 NDUFB9Q9Y6M9 179 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 FLT1P17948 1338 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
NUP50-205ENST00000419387 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
NUP50-205ENST00000419387 PDE4DIPQ5VU43 2346 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 ZSWIM8A7E2V4 1837 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
NUP50-205ENST00000419387 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
NUP50-205ENST00000419387 FCGRTP55899 365 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 TREML2Q5T2D2 321 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 SIRT2Q8IXJ6 389 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 CLASRPQ8N2M8 674 aaKnown RBP11.49□□□□□ -0.57
NUP50-205ENST00000419387 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
NUP50-205ENST00000419387 MAGEB6Q8N7X4 407 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
NUP50-205ENST00000419387 KIF1BPQ96EK5 621 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 DNAJC18Q9H819 358 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 AS3MTQ9HBK9 375 aa11.49□□□□□ -0.57
NUP50-205ENST00000419387 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms