RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 DPYSL4O14531 572 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
CPS1-202ENST00000417946 CYP21A2P08686 494 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 RHBDL3P58872 404 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 PPP4CP60510 307 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 ALX1Q15699 326 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 LRRFIP1Q32MZ4 808 aaKnown RBP8.19□□□□□ -1.1
CPS1-202ENST00000417946 ADCK5Q3MIX3 580 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 TSGA10IPQ3SY00 556 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 SPTY2D1Q68D10 685 aaPredicted RBP8.19□□□□□ -1.1
CPS1-202ENST00000417946 TMED8Q6PL24 325 aaPredicted RBP8.19□□□□□ -1.1
CPS1-202ENST00000417946 LARGE2Q8N3Y3 721 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 ZGPATQ8N5A5 531 aaKnown RBP8.19□□□□□ -1.1
CPS1-202ENST00000417946 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 TMX4Q9H1E5 349 aaPredicted RBP8.19□□□□□ -1.1
CPS1-202ENST00000417946 MKRN1Q9UHC7 482 aaKnown RBP8.19□□□□□ -1.1
CPS1-202ENST00000417946 SUGT1Q9Y2Z0 365 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
CPS1-202ENST00000417946 MAGEB6P1A0A0J9YX57 407 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 PSMD14O00487 310 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 VIL1P09327 827 aaKnown RBP8.18□□□□□ -1.1
CPS1-202ENST00000417946 ANAPC15P60006 121 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 CXCL9Q07325 125 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 C6orf132Q5T0Z8 1188 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 DZIP1Q86YF9 867 aaKnown RBP8.18□□□□□ -1.1
CPS1-202ENST00000417946 TBC1D10CQ8IV04 446 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 SH3RF3Q8TEJ3 882 aaPredicted RBP8.18□□□□□ -1.1
CPS1-202ENST00000417946 UPF2Q9HAU5 1272 aaKnown RBP8.18□□□□□ -1.1
CPS1-202ENST00000417946 WDR70Q9NW82 654 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 ZNRF3Q9ULT6 936 aa8.18□□□□□ -1.1
CPS1-202ENST00000417946 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 FZD9O00144 591 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 EIF5BO60841 1220 aaKnown RBP8.17□□□□□ -1.1
CPS1-202ENST00000417946 RAD17O75943 681 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 FGAP02671 866 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 CPA1P15085 419 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 BTDP43251 543 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 SCNN1DP51172 638 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 APOBEC3HQ6NTF7 200 aaKnown RBP8.17□□□□□ -1.1
CPS1-202ENST00000417946 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
CPS1-202ENST00000417946 HHIPL2Q6UWX4 724 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 NIM1KQ8IY84 436 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 IFNL3Q8IZI9 196 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 SDR42E1Q8WUS8 393 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 AIDAQ96BJ3 306 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 ZBED3Q96IU2 234 aaPredicted RBP8.17□□□□□ -1.1
CPS1-202ENST00000417946 TTC14Q96N46 770 aa8.17□□□□□ -1.1
CPS1-202ENST00000417946 AATFQ9NY61 560 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPS1-202ENST00000417946 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
CPS1-202ENST00000417946 GREB1LQ9C091 1923 aaPredicted RBP8.17□□□□□ -1.1
CPS1-202ENST00000417946 SPDYE16A6NNV3 312 aaPredicted RBP8.16□□□□□ -1.1
CPS1-202ENST00000417946 PATL2C9JE40 543 aaKnown RBP8.16□□□□□ -1.1
CPS1-202ENST00000417946 F8W031 263 aaPredicted RBP8.16□□□□□ -1.1
CPS1-202ENST00000417946 WDHD1O75717 1129 aaPredicted RBP8.16□□□□□ -1.1
CPS1-202ENST00000417946 CYP2D6P10635 497 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 CRKP46108 304 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 GSTO1P78417 241 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 RABEP1Q15276 862 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 PROX2Q3B8N5 592 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 KIAA0825Q8IV33 1275 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 ROBO3Q96MS0 1386 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 ZDHHC15Q96MV8 337 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 MRIQ9BWK5 157 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 TM6SF1Q9BZW5 370 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 DCP1AQ9NPI6 582 aaPredicted RBP8.16□□□□□ -1.1
CPS1-202ENST00000417946 DDX4Q9NQI0 724 aaKnown RBP8.16□□□□□ -1.1
CPS1-202ENST00000417946 KIAA1468Q9P260 1216 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 SLC4A4Q9Y6R1 1079 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 UTRNP46939 3433 aa8.16□□□□□ -1.1
CPS1-202ENST00000417946 NEDD4P46934 1319 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 CYP2D7A0A087X1C5 515 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 GNAT2P19087 354 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 COL9A1P20849 921 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 ANTXR2P58335 489 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 HAND2P61296 217 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 HDLBPQ00341 1268 aaKnown RBP8.15□□□□□ -1.1
CPS1-202ENST00000417946 CDC42EP5Q6NZY7 148 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 CTR9Q6PD62 1173 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 PACS2Q86VP3 889 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 MB21D2Q8IYB1 491 aaPredicted RBP8.15□□□□□ -1.1
CPS1-202ENST00000417946 SNX21Q969T3 373 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
CPS1-202ENST00000417946 TBC1D2Q9BYX2 928 aa8.15□□□□□ -1.1
CPS1-202ENST00000417946 UPF3BQ9BZI7 483 aaKnown RBP8.15□□□□□ -1.1
CPS1-202ENST00000417946 MYH8P13535 1937 aa8.15□□□□□ -1.11
CPS1-202ENST00000417946 FLT1P17948 1338 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 MYO3BQ8WXR4 1341 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 SOWAHBA6NEL2 793 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 E7EWF7 191 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 GRIN3BO60391 1043 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 EGFRP00533 1210 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 LDHCP07864 332 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 LMNB1P20700 586 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 MCCP23508 829 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 ZNF280AP59817 542 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms