RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 BOLA2Q9H3K6 86 aa18.59■□□□□ 0.57
NUP50-204ENST00000417702 SMARCA5O60264 1052 aaPredicted RBP18.58■□□□□ 0.56
NUP50-204ENST00000417702 HLA-DOAP06340 250 aa18.58■□□□□ 0.56
NUP50-204ENST00000417702 PDE6AP16499 860 aa18.58■□□□□ 0.56
NUP50-204ENST00000417702 ARHGEF6Q15052 776 aa18.58■□□□□ 0.56
NUP50-204ENST00000417702 FBXO46Q6PJ61 603 aaPredicted RBP18.58■□□□□ 0.56
NUP50-204ENST00000417702 FASTKD5Q7L8L6 764 aaKnown RBP18.58■□□□□ 0.56
NUP50-204ENST00000417702 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
NUP50-204ENST00000417702 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
NUP50-204ENST00000417702 PAG1Q9NWQ8 432 aa18.58■□□□□ 0.56
NUP50-204ENST00000417702 PALD1Q9ULE6 856 aa18.58■□□□□ 0.56
NUP50-204ENST00000417702 TRIM17Q9Y577 477 aa18.58■□□□□ 0.56
NUP50-204ENST00000417702 MAGEB6P1A0A0J9YX57 407 aa18.57■□□□□ 0.56
NUP50-204ENST00000417702 PDHXO00330 501 aa18.57■□□□□ 0.56
NUP50-204ENST00000417702 TLR2O60603 784 aa18.57■□□□□ 0.56
NUP50-204ENST00000417702 CD99L2Q8TCZ2 262 aa18.57■□□□□ 0.56
NUP50-204ENST00000417702 SAP30BPQ9UHR5 308 aaKnown RBP18.57■□□□□ 0.56
NUP50-204ENST00000417702 AFG3L2Q9Y4W6 797 aa18.57■□□□□ 0.56
NUP50-204ENST00000417702 CAP2P40123 477 aa18.56■□□□□ 0.56
NUP50-204ENST00000417702 EDC3Q96F86 508 aaKnown RBP18.56■□□□□ 0.56
NUP50-204ENST00000417702 GPATCH3Q96I76 525 aa18.56■□□□□ 0.56
NUP50-204ENST00000417702 HAUS7Q99871 368 aa18.56■□□□□ 0.56
NUP50-204ENST00000417702 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.56■□□□□ 0.56
NUP50-204ENST00000417702 EFCC1Q9HA90 598 aa18.56■□□□□ 0.56
NUP50-204ENST00000417702 HPS5Q9UPZ3 1129 aa18.56■□□□□ 0.56
NUP50-204ENST00000417702 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
NUP50-204ENST00000417702 ZNF532Q9HCE3 1301 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 A0A0G2JLL6 359 aaPredicted RBP18.55■□□□□ 0.56
NUP50-204ENST00000417702 TRIM75PA6NK02 468 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 MOGSQ13724 837 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 GADL1Q6ZQY3 521 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 OTOP1Q7RTM1 612 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 PRRT2Q7Z6L0 340 aaPredicted RBP18.55■□□□□ 0.56
NUP50-204ENST00000417702 CRBNQ96SW2 442 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 PARK7Q99497 189 aaKnown RBP18.55■□□□□ 0.56
NUP50-204ENST00000417702 TBC1D2Q9BYX2 928 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 ECHDC1Q9NTX5 307 aa18.55■□□□□ 0.56
NUP50-204ENST00000417702 KIF22Q14807 665 aa18.54■□□□□ 0.56
NUP50-204ENST00000417702 TTC6Q86TZ1 520 aa18.54■□□□□ 0.56
NUP50-204ENST00000417702 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
NUP50-204ENST00000417702 CRNKL1Q9BZJ0 848 aaKnown RBP18.54■□□□□ 0.56
NUP50-204ENST00000417702 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.54■□□□□ 0.56
NUP50-204ENST00000417702 DOCK1Q14185 1865 aa18.54■□□□□ 0.56
NUP50-204ENST00000417702 USP17L5A8MUK1 530 aa18.53■□□□□ 0.56
NUP50-204ENST00000417702 SLC4A8Q2Y0W8 1093 aa18.53■□□□□ 0.56
NUP50-204ENST00000417702 GPAT2Q6NUI2 795 aa18.53■□□□□ 0.56
NUP50-204ENST00000417702 CCDC84Q86UT8 332 aaPredicted RBP18.53■□□□□ 0.56
NUP50-204ENST00000417702 METTL16Q86W50 562 aaKnown RBP18.53■□□□□ 0.56
NUP50-204ENST00000417702 AS3MTQ9HBK9 375 aa18.53■□□□□ 0.56
NUP50-204ENST00000417702 TCRBV5S4A2TA0A5A2 114 aa18.52■□□□□ 0.56
NUP50-204ENST00000417702 ASNSP08243 561 aa18.52■□□□□ 0.56
NUP50-204ENST00000417702 SPP2Q13103 211 aa18.52■□□□□ 0.56
NUP50-204ENST00000417702 RRP1BQ14684 758 aaKnown RBP18.52■□□□□ 0.56
NUP50-204ENST00000417702 ZSCAN25Q6NSZ9 544 aa18.52■□□□□ 0.56
NUP50-204ENST00000417702 ZNF280CQ8ND82 737 aa18.52■□□□□ 0.56
NUP50-204ENST00000417702 DNAJC18Q9H819 358 aa18.52■□□□□ 0.56
NUP50-204ENST00000417702 GINM1Q9NU53 330 aa18.52■□□□□ 0.56
NUP50-204ENST00000417702 POLR3DP05423 398 aaPredicted RBP18.51■□□□□ 0.55
NUP50-204ENST00000417702 ADD2P35612 726 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 C17orf99Q6UX52 265 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
NUP50-204ENST00000417702 CPA4Q9UI42 421 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 SERPINB13Q9UIV8 391 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 PTPN22Q9Y2R2 807 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 SLC45A1Q9Y2W3 748 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 CDK5RAP2Q96SN8 1893 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 FOCADQ5VW36 1801 aa18.51■□□□□ 0.55
NUP50-204ENST00000417702 LACTBP83111 547 aaPredicted RBP18.5■□□□□ 0.55
NUP50-204ENST00000417702 UBE3CQ15386 1083 aa18.5■□□□□ 0.55
NUP50-204ENST00000417702 EHD4Q9H223 541 aa18.5■□□□□ 0.55
NUP50-204ENST00000417702 GDF11O95390 407 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 CYP2C8P10632 490 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 AAMPQ13685 434 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 LCORLQ8N3X6 602 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 PROCA1Q8NCQ7 364 aaPredicted RBP18.49■□□□□ 0.55
NUP50-204ENST00000417702 WDR18Q9BV38 432 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 ARMT1Q9H993 441 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 MCM9Q9NXL9 1143 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 AGTPBP1Q9UPW5 1226 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 MYH1P12882 1939 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 ADGRA2Q96PE1 1338 aa18.49■□□□□ 0.55
NUP50-204ENST00000417702 MBD4O95243 580 aa18.48■□□□□ 0.55
NUP50-204ENST00000417702 GNRH1P01148 92 aa18.48■□□□□ 0.55
NUP50-204ENST00000417702 RGS19P49795 217 aa18.48■□□□□ 0.55
NUP50-204ENST00000417702 HMGCS2P54868 508 aa18.48■□□□□ 0.55
NUP50-204ENST00000417702 SOX10P56693 466 aa18.48■□□□□ 0.55
NUP50-204ENST00000417702 SMCR8Q8TEV9 937 aaPredicted RBP18.48■□□□□ 0.55
NUP50-204ENST00000417702 PNMA3Q9UL41 463 aa18.48■□□□□ 0.55
NUP50-204ENST00000417702 ZBTB21Q9ULJ3 1066 aa18.48■□□□□ 0.55
NUP50-204ENST00000417702 SIPA1L1O43166 1804 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 ERC2O15083 957 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 PLCD1P51178 756 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 CAP1Q01518 475 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 PABPC4Q13310 644 aaKnown RBP eCLIP18.47■□□□□ 0.55
NUP50-204ENST00000417702 SLFNL1Q499Z3 407 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 TSHZ3Q63HK5 1081 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 TATDN1Q6P1N9 297 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 SDR42E1Q8WUS8 393 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 DDRGK1Q96HY6 314 aa18.47■□□□□ 0.55
NUP50-204ENST00000417702 DCP1AQ9NPI6 582 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms