RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 HLA-DOAP06340 250 aa13.58□□□□□ -0.24
RFFL-204ENST00000414419 HAUS7Q99871 368 aa13.58□□□□□ -0.24
RFFL-204ENST00000414419 R3HDMLQ9H3Y0 253 aa13.58□□□□□ -0.24
RFFL-204ENST00000414419 ZHX2Q9Y6X8 837 aa13.58□□□□□ -0.24
RFFL-204ENST00000414419 FLT1P17948 1338 aa13.58□□□□□ -0.24
RFFL-204ENST00000414419 FAM196BA6NMK8 535 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 CXCL11O14625 94 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 SLURP2P0DP57 97 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 PDE6AP16499 860 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 PTPRAP18433 802 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 FOXP4Q8IVH2 680 aaPredicted RBP13.57□□□□□ -0.24
RFFL-204ENST00000414419 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
RFFL-204ENST00000414419 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 SAP30BPQ9UHR5 308 aaKnown RBP13.57□□□□□ -0.24
RFFL-204ENST00000414419 PALD1Q9ULE6 856 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 KCNH4Q9UQ05 1017 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 ZNF532Q9HCE3 1301 aa13.57□□□□□ -0.24
RFFL-204ENST00000414419 CCDC85CA6NKD9 419 aa13.56□□□□□ -0.24
RFFL-204ENST00000414419 BTBD19C9JJ37 291 aa13.56□□□□□ -0.24
RFFL-204ENST00000414419 AAMPQ13685 434 aa13.56□□□□□ -0.24
RFFL-204ENST00000414419 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
RFFL-204ENST00000414419 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
RFFL-204ENST00000414419 FAM43AQ8N2R8 423 aa13.56□□□□□ -0.24
RFFL-204ENST00000414419 EDC3Q96F86 508 aaKnown RBP13.56□□□□□ -0.24
RFFL-204ENST00000414419 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
RFFL-204ENST00000414419 CRNKL1Q9BZJ0 848 aaKnown RBP13.56□□□□□ -0.24
RFFL-204ENST00000414419 PTPRFP10586 1907 aa13.55□□□□□ -0.24
RFFL-204ENST00000414419 CAP2P40123 477 aa13.55□□□□□ -0.24
RFFL-204ENST00000414419 SP3Q02447 781 aa13.55□□□□□ -0.24
RFFL-204ENST00000414419 SLC4A8Q2Y0W8 1093 aa13.55□□□□□ -0.24
RFFL-204ENST00000414419 FASTKD5Q7L8L6 764 aaKnown RBP13.55□□□□□ -0.24
RFFL-204ENST00000414419 ANKRD23Q86SG2 305 aa13.55□□□□□ -0.24
RFFL-204ENST00000414419 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
RFFL-204ENST00000414419 PHIPQ8WWQ0 1821 aa13.55□□□□□ -0.24
RFFL-204ENST00000414419 PDHXO00330 501 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 ARHGEF6Q15052 776 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 GADL1Q6ZQY3 521 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
RFFL-204ENST00000414419 TBC1D2Q9BYX2 928 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 AS3MTQ9HBK9 375 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 AFG3L2Q9Y4W6 797 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 SIPA1L1O43166 1804 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 NAV1Q8NEY1 1877 aa13.54□□□□□ -0.24
RFFL-204ENST00000414419 TRIM75PA6NK02 468 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 ERC2O15083 957 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 TLR2O60603 784 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
RFFL-204ENST00000414419 ASNSP08243 561 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 ADD2P35612 726 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 KIF22Q14807 665 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 SERPINB13Q9UIV8 391 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 TRIM17Q9Y577 477 aa13.53□□□□□ -0.24
RFFL-204ENST00000414419 A0A0G2JLL6 359 aaPredicted RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 TCRBV5S4A2TA0A5A2 114 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 MBD4O95243 580 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 UBE3CQ15386 1083 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 PRRT2Q7Z6L0 340 aaPredicted RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 CD99L2Q8TCZ2 262 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 PARK7Q99497 189 aaKnown RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 ARMT1Q9H993 441 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 GINM1Q9NU53 330 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 MCM9Q9NXL9 1143 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 TTC41PQ6P2S7 1318 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 MYH8P13535 1937 aa13.52□□□□□ -0.25
RFFL-204ENST00000414419 BAZ2AQ9UIF9 1905 aaKnown RBP13.52□□□□□ -0.25
RFFL-204ENST00000414419 SPP2Q13103 211 aa13.51□□□□□ -0.25
RFFL-204ENST00000414419 LRRFIP1Q32MZ4 808 aaKnown RBP13.51□□□□□ -0.25
RFFL-204ENST00000414419 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
RFFL-204ENST00000414419 FBXO46Q6PJ61 603 aaPredicted RBP13.51□□□□□ -0.25
RFFL-204ENST00000414419 CCDC84Q86UT8 332 aaPredicted RBP13.51□□□□□ -0.25
RFFL-204ENST00000414419 AMOTL1Q8IY63 956 aa13.51□□□□□ -0.25
RFFL-204ENST00000414419 LCORLQ8N3X6 602 aa13.51□□□□□ -0.25
RFFL-204ENST00000414419 EHD4Q9H223 541 aa13.51□□□□□ -0.25
RFFL-204ENST00000414419 RWDD1Q9H446 243 aaPredicted RBP13.51□□□□□ -0.25
RFFL-204ENST00000414419 EFCC1Q9HA90 598 aa13.51□□□□□ -0.25
RFFL-204ENST00000414419 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
RFFL-204ENST00000414419 GDF11O95390 407 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 MX1P20591 662 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 MOGSQ13724 837 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 RRP1BQ14684 758 aaKnown RBP13.5□□□□□ -0.25
RFFL-204ENST00000414419 OTOP1Q7RTM1 612 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 KBTBD3Q8NAB2 608 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 SDR42E1Q8WUS8 393 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 CABP5Q9NP86 173 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 ATP8A2Q9NTI2 1148 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
RFFL-204ENST00000414419 PLCD1P51178 756 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 HMGCS2P54868 508 aa13.49□□□□□ -0.25
RFFL-204ENST00000414419 PABPC4Q13310 644 aaKnown RBP eCLIP13.49□□□□□ -0.25
RFFL-204ENST00000414419 SLFNL1Q499Z3 407 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms