RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 NBPF9Q3BBW0 867 aa6.69□□□□□ -1.34
PRDM2-206ENST00000413440 DBNDD2Q9BQY9 259 aa6.69□□□□□ -1.34
PRDM2-206ENST00000413440 BCL2L12Q9HB09 334 aa6.69□□□□□ -1.34
PRDM2-206ENST00000413440 PDE8BO95263 885 aa6.69□□□□□ -1.34
PRDM2-206ENST00000413440 PNMA3Q9UL41 463 aa6.69□□□□□ -1.34
PRDM2-206ENST00000413440 RGL2O15211 777 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 SNAPC2Q13487 334 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 CDCA5Q96FF9 252 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 LARP6Q9BRS8 491 aaKnown RBP6.68□□□□□ -1.34
PRDM2-206ENST00000413440 NBPF3Q9H094 633 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 GPCPD1Q9NPB8 672 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 GPRC5DQ9NZD1 345 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 SORBS3O60504 671 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 LBX1P52954 281 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 MFSD6Q6ZSS7 791 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 ZNF70Q9UC06 446 aaPredicted RBP6.68□□□□□ -1.34
PRDM2-206ENST00000413440 FAM47CQ5HY64 1035 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 IQCA1Q86XH1 822 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 CCDC144CPQ8IYA2 1237 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 CCDC150Q8NCX0 1101 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 JAKMIP1Q96N16 626 aaKnown RBP6.68□□□□□ -1.34
PRDM2-206ENST00000413440 PSMD1Q99460 953 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 DEFB129Q9H1M3 183 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 GOLGA6L19H0YKK7 550 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 XRCC6P12956 609 aaKnown RBP eCLIP6.68□□□□□ -1.34
PRDM2-206ENST00000413440 AGBL3Q8NEM8 1001 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 CCDC77Q9BR77 488 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 CTNNA3Q9UI47 895 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 PALD1Q9ULE6 856 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 NRAPQ86VF7 1730 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 FAM196BA6NMK8 535 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 BECN2A8MW95 431 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 SEC24BO95487 1268 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 CCDC175P0C221 793 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 ABCB5Q2M3G0 1257 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 SKOR2Q2VWA4 1001 aaPredicted RBP6.68□□□□□ -1.34
PRDM2-206ENST00000413440 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
PRDM2-206ENST00000413440 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.68□□□□□ -1.34
PRDM2-206ENST00000413440 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.68□□□□□ -1.34
PRDM2-206ENST00000413440 FLOT1O75955 427 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 CSPG5O95196 566 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 CCNA1P78396 465 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 KIF23Q02241 960 aaPredicted RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 SAFBQ15424 915 aaKnown RBP eCLIP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 CDHR2Q9BYE9 1310 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 SHTN1A0MZ66 631 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 H7C1W4 665 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 TNPO2O14787 897 aaKnown RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 SPICE1Q8N0Z3 855 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 OPTNQ96CV9 577 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 TMEM39BQ9GZU3 492 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 CYP46A1Q9Y6A2 500 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 PRPF40AO75400 957 aaKnown RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 DYNLL1P63167 89 aaKnown RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 NUCB2P80303 420 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 SP4Q02446 784 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 RABEP1Q15276 862 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 SF3B3Q15393 1217 aaKnown RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 SLC9C1Q4G0N8 1177 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 RGMBQ6NW40 437 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 ANKRD26Q9UPS8 1709 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 HSPA1AP0DMV8 641 aaKnown RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 HSPA1BP0DMV9 641 aaKnown RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 CASTP20810 708 aaKnown RBP6.67□□□□□ -1.34
PRDM2-206ENST00000413440 KLRK1P26718 216 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 GTF2A2P52657 109 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 ANAPC15P60006 121 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 MECOMQ03112 1051 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 ECHDC1Q9NTX5 307 aa6.67□□□□□ -1.34
PRDM2-206ENST00000413440 WDR33Q9C0J8 1336 aaKnown RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 ZNF532Q9HCE3 1301 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 FIBPO43427 364 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 IGKV5-2P06315 115 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 CETPP11597 493 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 RNF41Q9H4P4 317 aaPredicted RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 PDRG1Q9NUG6 133 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 CAVIN1Q6NZI2 390 aaKnown RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 MOB2Q70IA6 237 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 NHSQ6T4R5 1651 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 HMGB1P1B2RPK0 211 aaPredicted RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 CALRP27797 417 aaKnown RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 FCGRTP55899 365 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 RNF214Q8ND24 703 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 SDR42E1Q8WUS8 393 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 KCNH4Q9UQ05 1017 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 C5P01031 1676 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 K7ELQ4 463 aaPredicted RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 USH1GQ495M9 461 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 SH3RF3Q8TEJ3 882 aaPredicted RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 ZKSCAN4Q969J2 545 aaPredicted RBP6.66□□□□□ -1.34
PRDM2-206ENST00000413440 MYOM1P52179 1685 aa6.66□□□□□ -1.34
PRDM2-206ENST00000413440 IFIT3O14879 490 aaKnown RBP6.65□□□□□ -1.34
PRDM2-206ENST00000413440 RNF113AO15541 343 aaKnown RBP6.65□□□□□ -1.34
PRDM2-206ENST00000413440 RAB11FIP4Q86YS3 637 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 PARK7Q99497 189 aaKnown RBP6.65□□□□□ -1.34
PRDM2-206ENST00000413440 LBHD1Q9BQE6 289 aaPredicted RBP6.65□□□□□ -1.34
PRDM2-206ENST00000413440 DDX23Q9BUQ8 820 aaKnown RBP6.65□□□□□ -1.34
PRDM2-206ENST00000413440 PNMA6EA0A0J9YXQ4 647 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 USP14P54578 494 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 ANKRD13AQ8IZ07 590 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms