RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 FBXL18Q96ME1 805 aa6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 MKNK2Q9HBH9 465 aa6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 MRS2Q9HD23 443 aa6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 PCDHB5Q9Y5E4 795 aa6.13□□□□□ -1.43
RNU4-55P-201ENST00000410731 PRAMEF27A3QJZ7 478 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 TFE3P19532 575 aaPredicted RBP6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 CDC37L1Q7L3B6 337 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 ARMCX6Q7L4S7 300 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 WNT10AQ9GZT5 417 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 MIR1-1HGQ9H1L0 117 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 PRDM10Q9NQV6 1147 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 VTI1BQ9UEU0 232 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 TACC3Q9Y6A5 838 aa6.12□□□□□ -1.43
RNU4-55P-201ENST00000410731 CAP2P40123 477 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 CDK8P49336 464 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 IRAK1P51617 712 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 MCTP1Q6DN14 999 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 STK11IPQ8N1F8 1099 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 FAM181AQ8N9Y4 354 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 PHC3Q8NDX5 983 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 NETO1Q8TDF5 533 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 MISP3Q96FF7 219 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 U3KQE9 123 aa6.11□□□□□ -1.43
RNU4-55P-201ENST00000410731 GFRA2O00451 464 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 LRIG2O94898 1065 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 CEACAM5P06731 702 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 OXCT1P55809 520 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 FAM214BQ7L5A3 538 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 ABI1Q8IZP0 508 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 PLD6Q8N2A8 252 aaKnown RBP6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 FLCNQ8NFG4 579 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 BCL2L13Q9BXK5 485 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 FBRSQ9HAH7 460 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 PAK6Q9NQU5 681 aaPredicted RBP6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
RNU4-55P-201ENST00000410731 COL17A1Q9UMD9 1497 aaPredicted RBP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 ZBTB7CA1YPR0 619 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 IGF2BP3O00425 579 aaKnown RBP eCLIP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 ETF1P62495 437 aaKnown RBP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 SLBPQ14493 270 aaKnown RBP eCLIP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 IFI16Q16666 785 aaKnown RBP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 ARHGAP27Q6ZUM4 889 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 CCDC84Q86UT8 332 aaPredicted RBP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 WFDC3Q8IUB2 231 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 AGBL5Q8NDL9 886 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 BCL7CQ8WUZ0 217 aaPredicted RBP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 HEXIM2Q96MH2 286 aaKnown RBP6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 ADGRE2Q9UHX3 823 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 SLC5A6Q9Y289 635 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 TLR6Q9Y2C9 796 aa6.09□□□□□ -1.43
RNU4-55P-201ENST00000410731 GRK4P32298 578 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 RPL6Q02878 288 aaKnown RBP6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 NKG7Q16617 165 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 TMCO4Q5TGY1 634 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 HID1Q8IV36 788 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 TP53INP2Q8IXH6 220 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 GIPC2Q8TF65 315 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 RHOVQ96L33 236 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 FOXQ1Q9C009 403 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 MAPK8IP1Q9UQF2 711 aa6.08□□□□□ -1.44
RNU4-55P-201ENST00000410731 TMEM265A0A087WTH1 108 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 SLITRK5O94991 958 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 EOMESO95936 686 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 LMNB2Q03252 620 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 ZNF326Q5BKZ1 582 aaKnown RBP6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 DIEXFQ68CQ4 756 aaKnown RBP6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 CBLL1Q75N03 491 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 MFSD2AQ8NA29 543 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 RSRP1Q9BUV0 290 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 TNKS2Q9H2K2 1166 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 PRDM5Q9NQX1 630 aaPredicted RBP6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 VAV3Q9UKW4 847 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 PLAGL2Q9UPG8 496 aa6.07□□□□□ -1.44
RNU4-55P-201ENST00000410731 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 CST3P01034 146 aaPredicted RBP6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 ITIH2P19823 946 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 PRKCQQ04759 706 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 PWP1Q13610 501 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 MRPL58Q14197 206 aaKnown RBP6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 ZNF574Q6ZN55 896 aaPredicted RBP6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 HOMEZQ8IX15 550 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 HRASLS5Q96KN8 279 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 TMEM74Q96NL1 305 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 MIPEPQ99797 713 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 BCL11AQ9H165 835 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 SNX11Q9Y5W9 270 aa6.06□□□□□ -1.44
RNU4-55P-201ENST00000410731 GNAT3A8MTJ3 354 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 CILPO75339 1184 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 PF4P02776 101 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 PGRP06401 933 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 PDE4BQ07343 736 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 CAMK2GQ13555 558 aaPredicted RBP6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 PRAMEF13Q5VWM6 474 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 BNC2Q6ZN30 1099 aaPredicted RBP6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 C22orf34Q6ZV56 151 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 SPRED2Q7Z698 418 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 SPACA3Q8IXA5 215 aa6.05□□□□□ -1.44
RNU4-55P-201ENST00000410731 MRPL41Q8IXM3 137 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms