RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 YEATS4O95619 227 aa17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 SEC23AQ15436 765 aa17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 NID2Q14112 1375 aa17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 RGL2O15211 777 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 NPHP1O15259 732 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 HIBADHP31937 336 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 RFC4P35249 363 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 RTN1Q16799 776 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 SHISA4Q96DD7 197 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 KCNF1Q9H3M0 494 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 CYP2D6P10635 497 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 MEX3CQ5U5Q3 659 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 CTR9Q6PD62 1173 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 CPLX2Q6PUV4 134 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 KCNG4Q8TDN1 519 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 MAST2Q6P0Q8 1798 aa17.6■□□□□ 0.41
SCAMP4-202ENST00000409472 A0A1W2PQ27 194 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 A0A1W2PQ64 194 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 A0A1W2PQD8 194 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 IFNAR1P17181 557 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 ENAHQ8N8S7 591 aaPredicted RBP17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 TDRD7Q8NHU6 1098 aaKnown RBP17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 ANAPC4Q9UJX5 808 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 LAMB1P07942 1786 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 KIAA1551Q9HCM1 1747 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 hCG_1642624A0A1W2PR95 340 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 NMT2O60551 498 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 KIF20AO95235 890 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 IQCB1Q15051 598 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 PTPAQ15257 358 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 GRIK5Q16478 980 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 MAP3K14Q99558 947 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 UBAC1Q9BSL1 405 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 MYH6P13533 1939 aa17.59■□□□□ 0.41
SCAMP4-202ENST00000409472 UBR3Q6ZT12 1888 aa17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 STK36Q9NRP7 1315 aa17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 USP17L12C9JPN9 530 aa17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 USP17L21D6R901 530 aa17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 TRAPPC3LQ5T215 181 aa17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 SEPT12Q8IYM1 358 aa17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 GTPBP4Q9BZE4 634 aaKnown RBP17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 RNF41Q9H4P4 317 aaPredicted RBP17.58■□□□□ 0.41
SCAMP4-202ENST00000409472 BTBD18B2RXH4 712 aa17.58■□□□□ 0.4
SCAMP4-202ENST00000409472 PFKFB1P16118 471 aa17.58■□□□□ 0.4
SCAMP4-202ENST00000409472 GNL2Q13823 731 aaKnown RBP17.58■□□□□ 0.4
SCAMP4-202ENST00000409472 CLIC6Q96NY7 704 aa17.58■□□□□ 0.4
SCAMP4-202ENST00000409472 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
SCAMP4-202ENST00000409472 CCDC88AQ3V6T2 1871 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 SLC39A14Q15043 492 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 STX1AQ16623 288 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 FANCBQ8NB91 859 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 ESR2Q92731 530 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 ANKRD2Q9GZV1 360 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 ERICH2A1L162 156 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 HSPA1LP34931 641 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 NR5A1Q13285 461 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 CNBD1Q8NA66 436 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 OXER1Q8TDS5 423 aa17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 DCP1AQ9NPI6 582 aaPredicted RBP17.57■□□□□ 0.4
SCAMP4-202ENST00000409472 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 SEMA3EO15041 775 aa17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 CTAGE5O15320 804 aa17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 PRR5LQ6MZQ0 368 aa17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 SHC4Q6S5L8 630 aa17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 NRBP1Q9UHY1 535 aa17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 PYCARDQ9ULZ3 195 aa17.56■□□□□ 0.4
SCAMP4-202ENST00000409472 PLEKHA8P1O95397 391 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 PTGS1P23219 599 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 TOB1P50616 345 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 KIAA2012Q0VF49 1180 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 TRIM29Q14134 588 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 DHX40Q8IX18 779 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 DIS3L2Q8IYB7 885 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 ZSCAN10Q96SZ4 725 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 SDF4Q9BRK5 362 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 BAZ2BQ9UIF8 2168 aaKnown RBP17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 BIN1O00499 593 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 MMP1P03956 469 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 ZSCAN20P17040 1043 aaPredicted RBP17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 ZNF75DP51815 510 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 DPCR1Q3MIW9 517 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 FAM47AQ5JRC9 791 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 PLA2G4DQ86XP0 818 aa17.55■□□□□ 0.4
SCAMP4-202ENST00000409472 FAM205CA6NFA0 338 aa17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 ZNF202O95125 648 aa17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 GRIN1Q05586 938 aa17.54■□□□□ 0.4
SCAMP4-202ENST00000409472 TRIM5Q9C035 493 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms