RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SLF2Q8IX21 1173 aa20.75■□□□□ 0.91
CHMP3-203ENST00000409225 ZNF280CQ8ND82 737 aa20.75■□□□□ 0.91
CHMP3-203ENST00000409225 TRIB2Q92519 343 aa20.75■□□□□ 0.91
CHMP3-203ENST00000409225 ASCC2Q9H1I8 757 aaPredicted RBP20.75■□□□□ 0.91
CHMP3-203ENST00000409225 OGDHLQ9ULD0 1010 aa20.75■□□□□ 0.91
CHMP3-203ENST00000409225 LOC285556D6RIA3 1793 aa20.74■□□□□ 0.91
CHMP3-203ENST00000409225 CIAO1O76071 339 aa20.74■□□□□ 0.91
CHMP3-203ENST00000409225 CYP2B6P20813 491 aa20.74■□□□□ 0.91
CHMP3-203ENST00000409225 CCDC102BQ68D86 513 aa20.74■□□□□ 0.91
CHMP3-203ENST00000409225 COL25A1Q9BXS0 654 aaPredicted RBP20.74■□□□□ 0.91
CHMP3-203ENST00000409225 MROH7-TTC4A0A0A0MT08 1334 aa20.74■□□□□ 0.91
CHMP3-203ENST00000409225 PFASO15067 1338 aa20.74■□□□□ 0.91
CHMP3-203ENST00000409225 TBC1D12O60347 775 aa20.73■□□□□ 0.91
CHMP3-203ENST00000409225 RASGRF1Q13972 1273 aa20.73■□□□□ 0.91
CHMP3-203ENST00000409225 FAM163AQ96GL9 167 aaPredicted RBP20.73■□□□□ 0.91
CHMP3-203ENST00000409225 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
CHMP3-203ENST00000409225 PRKAR2AP13861 404 aaKnown RBP20.72■□□□□ 0.91
CHMP3-203ENST00000409225 FBXO3Q9UK99 471 aa20.72■□□□□ 0.91
CHMP3-203ENST00000409225 PLXNB2O15031 1838 aa20.71■□□□□ 0.91
CHMP3-203ENST00000409225 IL15P40933 162 aaPredicted RBP20.71■□□□□ 0.91
CHMP3-203ENST00000409225 RHBDL3P58872 404 aa20.71■□□□□ 0.91
CHMP3-203ENST00000409225 SPTY2D1Q68D10 685 aaPredicted RBP20.71■□□□□ 0.91
CHMP3-203ENST00000409225 PA2G4Q9UQ80 394 aaKnown RBP20.71■□□□□ 0.91
CHMP3-203ENST00000409225 GPR75-ASB3A0A0A6YYF3 556 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 USP17L5A8MUK1 530 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 PEX10O60683 326 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 MDM2Q00987 491 aaPredicted RBP20.7■□□□□ 0.9
CHMP3-203ENST00000409225 MECOMQ03112 1051 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 RRP1BQ14684 758 aaKnown RBP20.7■□□□□ 0.9
CHMP3-203ENST00000409225 MAP3K21Q5TCX8 1036 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 SSH1Q8WYL5 1049 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 TBC1D2Q9BYX2 928 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 MORF4L1Q9UBU8 362 aa20.7■□□□□ 0.9
CHMP3-203ENST00000409225 UNC80Q8N2C7 3258 aa20.69■□□□□ 0.9
CHMP3-203ENST00000409225 UBTFL1P0CB47 393 aaPredicted RBP20.69■□□□□ 0.9
CHMP3-203ENST00000409225 CAP2P40123 477 aa20.69■□□□□ 0.9
CHMP3-203ENST00000409225 IRX3P78415 501 aaPredicted RBP20.69■□□□□ 0.9
CHMP3-203ENST00000409225 SH3D19Q5HYK7 790 aa20.69■□□□□ 0.9
CHMP3-203ENST00000409225 ERICH6Q7L0X2 663 aa20.69■□□□□ 0.9
CHMP3-203ENST00000409225 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.69■□□□□ 0.9
CHMP3-203ENST00000409225 NUDT12Q9BQG2 462 aa20.69■□□□□ 0.9
CHMP3-203ENST00000409225 ATAD5Q96QE3 1844 aa20.69■□□□□ 0.9
CHMP3-203ENST00000409225 ZBTB22O15209 634 aa20.68■□□□□ 0.9
CHMP3-203ENST00000409225 TIMM10P62072 90 aa20.68■□□□□ 0.9
CHMP3-203ENST00000409225 LRRC26Q2I0M4 334 aa20.68■□□□□ 0.9
CHMP3-203ENST00000409225 ZNF384Q8TF68 577 aa20.68■□□□□ 0.9
CHMP3-203ENST00000409225 AS3MTQ9HBK9 375 aa20.68■□□□□ 0.9
CHMP3-203ENST00000409225 PDS5AQ29RF7 1337 aaKnown RBP20.68■□□□□ 0.9
CHMP3-203ENST00000409225 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
CHMP3-203ENST00000409225 COL6A1P12109 1028 aa20.67■□□□□ 0.9
CHMP3-203ENST00000409225 ZKSCAN1P17029 563 aaPredicted RBP20.67■□□□□ 0.9
CHMP3-203ENST00000409225 CACNB2Q08289 660 aaPredicted RBP20.67■□□□□ 0.9
CHMP3-203ENST00000409225 MTMR2Q13614 643 aa20.67■□□□□ 0.9
CHMP3-203ENST00000409225 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
CHMP3-203ENST00000409225 SOCS4Q8WXH5 440 aa20.67■□□□□ 0.9
CHMP3-203ENST00000409225 FAM161BQ96MY7 647 aa20.67■□□□□ 0.9
CHMP3-203ENST00000409225 P2RX7Q99572 595 aaKnown RBP20.67■□□□□ 0.9
CHMP3-203ENST00000409225 TXNRD2Q9NNW7 524 aa20.67■□□□□ 0.9
CHMP3-203ENST00000409225 CCND3P30281 292 aaPredicted RBP20.66■□□□□ 0.9
CHMP3-203ENST00000409225 PDE3AQ14432 1141 aa20.66■□□□□ 0.9
CHMP3-203ENST00000409225 GPRC5AQ8NFJ5 357 aa20.66■□□□□ 0.9
CHMP3-203ENST00000409225 GUCD1Q96NT3 240 aa20.66■□□□□ 0.9
CHMP3-203ENST00000409225 TMOD4Q9NZQ9 345 aa20.66■□□□□ 0.9
CHMP3-203ENST00000409225 COL2A1P02458 1487 aaPredicted RBP20.65■□□□□ 0.9
CHMP3-203ENST00000409225 XRCC5P13010 732 aaKnown RBP20.65■□□□□ 0.9
CHMP3-203ENST00000409225 HERVK_113P62684 666 aa20.65■□□□□ 0.9
CHMP3-203ENST00000409225 CCL14Q16627 93 aa20.65■□□□□ 0.9
CHMP3-203ENST00000409225 TRMT44Q8IYL2 757 aaKnown RBP20.65■□□□□ 0.9
CHMP3-203ENST00000409225 XAGE2Q96GT9 111 aa20.65■□□□□ 0.9
CHMP3-203ENST00000409225 POTEB2H3BUK9 544 aa20.64■□□□□ 0.89
CHMP3-203ENST00000409225 BACE1P56817 501 aa20.64■□□□□ 0.89
CHMP3-203ENST00000409225 GSTO1P78417 241 aa20.64■□□□□ 0.89
CHMP3-203ENST00000409225 LHX8Q68G74 356 aa20.64■□□□□ 0.89
CHMP3-203ENST00000409225 ZNF521Q96K83 1311 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 A0A1B0GUL7 405 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 LDHCP07864 332 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 MAPK4P31152 587 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
CHMP3-203ENST00000409225 MVPQ14764 893 aaKnown RBP20.63■□□□□ 0.89
CHMP3-203ENST00000409225 FAM109BQ6ICB4 259 aaPredicted RBP20.63■□□□□ 0.89
CHMP3-203ENST00000409225 TBC1D9Q6ZT07 1266 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 CCAR1Q8IX12 1150 aaKnown RBP20.63■□□□□ 0.89
CHMP3-203ENST00000409225 TEX11Q8IYF3 940 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 NSUN4Q96CB9 384 aaKnown RBP20.63■□□□□ 0.89
CHMP3-203ENST00000409225 WDR18Q9BV38 432 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 COPRSQ9NQ92 184 aa20.63■□□□□ 0.89
CHMP3-203ENST00000409225 HERC5Q9UII4 1024 aaKnown RBP20.63■□□□□ 0.89
CHMP3-203ENST00000409225 MAP4K4O95819 1239 aaPredicted RBP20.62■□□□□ 0.89
CHMP3-203ENST00000409225 RGS2P41220 211 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 Q3C1V9 767 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 PI16Q6UXB8 463 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 GPR142Q7Z601 462 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 USP6NLQ92738 828 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 PAGR1Q9BTK6 254 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 PORCNQ9H237 461 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 RAI14Q9P0K7 980 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 HMG20BQ9P0W2 317 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 RBPJLQ9UBG7 517 aa20.62■□□□□ 0.89
CHMP3-203ENST00000409225 ANP32CO43423 234 aa20.61■□□□□ 0.89
CHMP3-203ENST00000409225 ERVK-9P63128 1117 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms