RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 LRRC2Q9BYS8 371 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 DHX36Q9H2U1 1008 aaKnown RBP12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ZSCAN16Q9H4T2 348 aaPredicted RBP12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 LY9Q9HBG7 655 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 HDAC9Q9UKV0 1011 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ZNRF3Q9ULT6 936 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 ZDHHC9Q9Y397 364 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 NAV1Q8NEY1 1877 aa12.08□□□□□ -0.48
SNORD88C-201ENST00000408061 MYH1P12882 1939 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 GOLGA8BA8MQT2 603 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 IARSP41252 1262 aaKnown RBP12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 CRKP46108 304 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 METAP2P50579 478 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 STK3Q13188 491 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 SEC23AQ15436 765 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 FER1L6Q2WGJ9 1857 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 RRP12Q5JTH9 1297 aaKnown RBP12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 ATL3Q6DD88 541 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 NIM1KQ8IY84 436 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 NSUN7Q8NE18 718 aaKnown RBP12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 WASF1Q92558 559 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 IDI2Q9BXS1 227 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 MKNK2Q9HBH9 465 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 USP40Q9NVE5 1235 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 SWAP70Q9UH65 585 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
SNORD88C-201ENST00000408061 RANBP6O60518 1105 aaKnown RBP12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 PTGER2P43116 358 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 TNIP1Q15025 636 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 APOBEC3HQ6NTF7 200 aaKnown RBP12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 CATIPQ7Z7H3 387 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 OGFOD1Q8N543 542 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 MTMR14Q8NCE2 650 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 EHD4Q9H223 541 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 TAOK3Q9H2K8 898 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 SPON1Q9HCB6 807 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 RBM28Q9NW13 759 aaKnown RBP12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 HPS5Q9UPZ3 1129 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 ZNF646O15015 1829 aaPredicted RBP12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 ECM29Q5VYK3 1845 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 FLT1P17948 1338 aa12.06□□□□□ -0.48
SNORD88C-201ENST00000408061 SCN9AQ15858 1988 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 ARFGEF1Q9Y6D6 1849 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 TSPY2A6NKD2 308 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 ENTPD3O75355 529 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 DDAH1O94760 285 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 F13A1P00488 732 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 HLA-DOAP06340 250 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 USP17L8P0C7I0 530 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 IFNAR1P17181 557 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 IFIT1BQ5T764 474 aaKnown RBP12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 FKBP1CQ5VVH2 108 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 MAPKAPK5Q8IW41 473 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 TACC3Q9Y6A5 838 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 COL2A1P02458 1487 aaPredicted RBP12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 TNKSO95271 1327 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 STK36Q9NRP7 1315 aa12.05□□□□□ -0.48
SNORD88C-201ENST00000408061 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 PTPDC1A2A3K4 754 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 GOLGA8AA7E2F4 631 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 H3BQV1 296 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 WDHD1O75717 1129 aaPredicted RBP12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 CTDNEP1O95476 244 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 CCT2P78371 535 aaKnown RBP12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 NBR1Q14596 966 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 CDC42EP5Q6NZY7 148 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 FOXP4Q8IVH2 680 aaPredicted RBP12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 TRIM22Q8IYM9 498 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 ZNF654Q8IZM8 581 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 FANCBQ8NB91 859 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 NEDD1Q8NHV4 660 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 CCDC17Q96LX7 622 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 GMLQ99445 158 aa12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
SNORD88C-201ENST00000408061 CYP2D7A0A087X1C5 515 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 YDJCA8MPS7 323 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 KIF5BP33176 963 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 CDK8P49336 464 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 GNAQP50148 359 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 TFAP4Q01664 338 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 GABPAQ06546 454 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 PKP1Q13835 747 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 RTN1Q16799 776 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 KIAA0825Q8IV33 1275 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 ENAHQ8N8S7 591 aaPredicted RBP12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 INCENPQ9NQS7 918 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms