RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 WIPI1Q5MNZ9 446 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 INTS5Q6P9B9 1019 aaKnown RBP7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 FAM214BQ7L5A3 538 aa7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 METTL22Q9BUU2 404 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 RSRP1Q9BUV0 290 aa7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 FBRSQ9HAH7 460 aa7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 ATG3Q9NT62 314 aa7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 SNCAIPQ9Y6H5 919 aa7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
HMGB1P13-201ENST00000406019 FAM221AA4D161 298 aa7.86□□□□□ -1.15
HMGB1P13-201ENST00000406019 LEFTY1O75610 366 aa7.86□□□□□ -1.15
HMGB1P13-201ENST00000406019 RECKO95980 971 aa7.86□□□□□ -1.15
HMGB1P13-201ENST00000406019 LMNB2Q03252 620 aa7.86□□□□□ -1.15
HMGB1P13-201ENST00000406019 CCDC84Q86UT8 332 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P13-201ENST00000406019 OSBPL1AQ9BXW6 950 aa7.86□□□□□ -1.15
HMGB1P13-201ENST00000406019 KCNQ5Q9NR82 932 aa7.86□□□□□ -1.15
HMGB1P13-201ENST00000406019 F6X3S4 739 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 RNGTTO60942 597 aaKnown RBP7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 CAP2P40123 477 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 SLBPQ14493 270 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 TMEM74Q96NL1 305 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 DUSP23Q9BVJ7 150 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 WNT10AQ9GZT5 417 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 COPRSQ9NQ92 184 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 LEMD3Q9Y2U8 911 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 TACC3Q9Y6A5 838 aa7.85□□□□□ -1.15
HMGB1P13-201ENST00000406019 CILPO75339 1184 aa7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 PRNPP04156 253 aa7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 FAM87AP0C7U9 286 aa7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 BNC2Q6ZN30 1099 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 HDXQ7Z353 690 aa7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 WFDC3Q8IUB2 231 aa7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 ELMO3Q96BJ8 720 aa7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 MIR1-1HGQ9H1L0 117 aa7.84□□□□□ -1.15
HMGB1P13-201ENST00000406019 PF4P02776 101 aa7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 CYP27A1Q02318 531 aa7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 CAMK2GQ13555 558 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 NKG7Q16617 165 aa7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 TSNAXIP1Q2TAA8 658 aa7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 GIMAP7Q8NHV1 300 aa7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 C8orf37Q96NL8 207 aa7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 PCMTD2Q9NV79 361 aa7.83□□□□□ -1.16
HMGB1P13-201ENST00000406019 PRAMEF27A3QJZ7 478 aa7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 GRIK1P39086 918 aa7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 RPL6Q02878 288 aaKnown RBP7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 TOP6BLQ8N6T0 577 aa7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 HEXIM2Q96MH2 286 aaKnown RBP7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 USP35Q9P2H5 1018 aa7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 ZC3H7BQ9UGR2 993 aaKnown RBP7.82□□□□□ -1.16
HMGB1P13-201ENST00000406019 F13A1P00488 732 aa7.81□□□□□ -1.16
HMGB1P13-201ENST00000406019 GRK4P32298 578 aa7.81□□□□□ -1.16
HMGB1P13-201ENST00000406019 ITGAEP38570 1179 aa7.81□□□□□ -1.16
HMGB1P13-201ENST00000406019 DUSP27Q5VZP5 1158 aa7.81□□□□□ -1.16
HMGB1P13-201ENST00000406019 ARMCX6Q7L4S7 300 aa7.81□□□□□ -1.16
HMGB1P13-201ENST00000406019 ZNF507Q8TCN5 953 aa7.81□□□□□ -1.16
HMGB1P13-201ENST00000406019 GATAD2BQ8WXI9 593 aa7.81□□□□□ -1.16
HMGB1P13-201ENST00000406019 CYP26A1O43174 497 aa7.8□□□□□ -1.16
HMGB1P13-201ENST00000406019 EOMESO95936 686 aa7.8□□□□□ -1.16
HMGB1P13-201ENST00000406019 KCT2Q8NC54 265 aa7.8□□□□□ -1.16
HMGB1P13-201ENST00000406019 PRDM10Q9NQV6 1147 aa7.8□□□□□ -1.16
HMGB1P13-201ENST00000406019 RBAK-RBAKDNI3L0D1 243 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 GREM1O60565 184 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 LRIG2O94898 1065 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 SLITRK5O94991 958 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 OXCT1P55809 520 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 PWP1Q13610 501 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 CYP27C1Q4G0S4 372 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 BACH2Q9BYV9 841 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 TJP2Q9UDY2 1190 aa7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 POLR3KQ9Y2Y1 108 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P13-201ENST00000406019 PRR36Q9H6K5 1346 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 CST3P01034 146 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 GBP2P32456 591 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 FANCCQ00597 558 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 FBXL19Q6PCT2 694 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 RELL1Q8IUW5 271 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 HID1Q8IV36 788 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 MRPL41Q8IXM3 137 aaKnown RBP7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 FAM181AQ8N9Y4 354 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 FBXO27Q8NI29 283 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 JARID2Q92833 1246 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 LRRC3Q9BY71 257 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 FOXQ1Q9C009 403 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 MKNK2Q9HBH9 465 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 LRRC4CQ9HCJ2 640 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 SSU72Q9NP77 194 aaKnown RBP7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 CCDC39Q9UFE4 941 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 ADAMTS1Q9UHI8 967 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 PLAGL2Q9UPG8 496 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 CORINQ9Y5Q5 1042 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 CNTNAP4Q9C0A0 1308 aa7.78□□□□□ -1.16
HMGB1P13-201ENST00000406019 FAM160A1Q05DH4 1040 aa7.77□□□□□ -1.17
HMGB1P13-201ENST00000406019 FAM196AQ6ZSG2 479 aa7.77□□□□□ -1.17
HMGB1P13-201ENST00000406019 ACSF2Q96CM8 615 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P13-201ENST00000406019 BCL11AQ9H165 835 aa7.77□□□□□ -1.17
HMGB1P13-201ENST00000406019 PICK1Q9NRD5 415 aa7.77□□□□□ -1.17
HMGB1P13-201ENST00000406019 ADAM30Q9UKF2 790 aa7.77□□□□□ -1.17
HMGB1P13-201ENST00000406019 IGF2BP3O00425 579 aaKnown RBP eCLIP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms