RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 CAPN12Q6ZSI9 719 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 CFAP57Q96MR6 1250 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 C19orf44Q9H6X5 657 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 TESPA1A2RU30 521 aaPredicted RBP15.37■□□□□ 0.05
VAPA-202ENST00000400000 COBLO75128 1261 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 TRAF1Q13077 416 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 TSTA3Q13630 321 aaPredicted RBP15.37■□□□□ 0.05
VAPA-202ENST00000400000 MRPL44Q9H9J2 332 aaKnown RBP15.37■□□□□ 0.05
VAPA-202ENST00000400000 SEPT10Q9P0V9 454 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 OPA1O60313 960 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 ST7Q9NRC1 585 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 MAGED2Q9UNF1 606 aaPredicted RBP15.37■□□□□ 0.05
VAPA-202ENST00000400000 NPATQ14207 1427 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 PRPF6O94906 941 aaKnown RBP15.37■□□□□ 0.05
VAPA-202ENST00000400000 VPS52Q8N1B4 723 aa15.37■□□□□ 0.05
VAPA-202ENST00000400000 CCDC110Q8TBZ0 833 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 KIFAP3Q92845 792 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 RBM28Q9NW13 759 aaKnown RBP15.36■□□□□ 0.05
VAPA-202ENST00000400000 SLC1A4P43007 532 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 CALCOCO2Q13137 446 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 APOL6Q9BWW8 343 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 GMNNO75496 209 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 ITIH3Q06033 890 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 ITKQ08881 620 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 CUL4BQ13620 913 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 DCAF5Q96JK2 942 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 CEP85LQ5SZL2 805 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 FAM102BQ5T8I3 360 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 IQUBQ8NA54 791 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 DDX12PQ92771 950 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 AZI2Q9H6S1 392 aa15.36■□□□□ 0.05
VAPA-202ENST00000400000 LPXNO60711 386 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 UVSSAQ2YD98 709 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.35■□□□□ 0.05
VAPA-202ENST00000400000 ANKRD36BQ8N2N9 1353 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 GDAP1L1Q96MZ0 367 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 SAT1P21673 171 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 SPAG1Q07617 926 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 SCYL2Q6P3W7 929 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 TRMT44Q8IYL2 757 aaKnown RBP15.35■□□□□ 0.05
VAPA-202ENST00000400000 KRT222Q8N1A0 295 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 SNX29Q8TEQ0 813 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 TAB2Q9NYJ8 693 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 MTUS1Q9ULD2 1270 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 GPAA1O43292 621 aa15.35■□□□□ 0.05
VAPA-202ENST00000400000 EDC3Q96F86 508 aaKnown RBP15.35■□□□□ 0.05
VAPA-202ENST00000400000 BAG1Q99933 345 aaPredicted RBP15.35■□□□□ 0.05
VAPA-202ENST00000400000 MTRF1LQ9UGC7 380 aaKnown RBP15.35■□□□□ 0.05
VAPA-202ENST00000400000 AKR1B15C9JRZ8 316 aaPredicted RBP15.34■□□□□ 0.05
VAPA-202ENST00000400000 M0QZ92 97 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 ZBED4O75132 1171 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 IGSF22Q8N9C0 903 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 VPS54Q9P1Q0 977 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 SLC27A2O14975 620 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 ZNF131P52739 623 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 BRDTQ58F21 947 aaPredicted RBP15.34■□□□□ 0.05
VAPA-202ENST00000400000 ADAT2Q7Z6V5 191 aaKnown RBP15.34■□□□□ 0.05
VAPA-202ENST00000400000 LINS1Q8NG48 757 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 GLG1Q92896 1179 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 TBC1D31Q96DN5 1066 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 CHMLP26374 656 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
VAPA-202ENST00000400000 DCUN1D2Q6PH85 259 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 PPP1R16BQ96T49 567 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 ABCC1P33527 1531 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 CALUO43852 315 aaPredicted RBP15.34■□□□□ 0.05
VAPA-202ENST00000400000 U2AF2P26368 475 aaKnown RBP eCLIP15.34■□□□□ 0.053e-7■■■□□ 16.3
VAPA-202ENST00000400000 FOXD4Q12950 439 aaPredicted RBP15.34■□□□□ 0.05
VAPA-202ENST00000400000 KIAA0825Q8IV33 1275 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 DCLK2Q8N568 766 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 TNNI1P19237 187 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 RPL13P26373 211 aaKnown RBP15.34■□□□□ 0.05
VAPA-202ENST00000400000 LRRC43Q8N309 656 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 CCDC87Q9NVE4 849 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 CYP2J2P51589 502 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
VAPA-202ENST00000400000 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
VAPA-202ENST00000400000 HERC4Q5GLZ8 1057 aaPredicted RBP15.33■□□□□ 0.05
VAPA-202ENST00000400000 NCAPG2Q86XI2 1143 aa15.33■□□□□ 0.05
VAPA-202ENST00000400000 CSGALNACT2Q8N6G5 542 aa15.33■□□□□ 0.05
VAPA-202ENST00000400000 TRPC6Q9Y210 931 aa15.33■□□□□ 0.05
VAPA-202ENST00000400000 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 ZAP70P43403 619 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 CALCRLQ16602 461 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 DNAJC10Q8IXB1 793 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 STMN4Q9H169 189 aaPredicted RBP15.33■□□□□ 0.04
VAPA-202ENST00000400000 SH2D4AQ9H788 454 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 USP40Q9NVE5 1235 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 H7C1D1 291 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 GKAP1Q5VSY0 366 aaPredicted RBP15.33■□□□□ 0.04
VAPA-202ENST00000400000 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 THRAP3Q9Y2W1 955 aaKnown RBP15.33■□□□□ 0.04
VAPA-202ENST00000400000 BZW2Q9Y6E2 419 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms