RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C2CD5Q86YS7 1000 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 ERCC4Q92889 916 aaPredicted RBP16.04■□□□□ 0.16
SCAF4-202ENST00000399804 GPCPD1Q9NPB8 672 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 AKAP12Q02952 1782 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 PEAK1Q9H792 1746 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 RFX7Q2KHR2 1363 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 BTBD18B2RXH4 712 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 PIK3AP1Q6ZUJ8 805 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 TMC6Q7Z403 805 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 VWA3AA6NCI4 1184 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 NR1I2O75469 434 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 NTSR2O95665 410 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 CCDC186Q7Z3E2 898 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 CUL5Q93034 780 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 TANGO6Q9C0B7 1094 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
SCAF4-202ENST00000399804 CAMTA1Q9Y6Y1 1673 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 OFD1O75665 1012 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 TBC1D10CQ8IV04 446 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 KIAA0825Q8IV33 1275 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 YEATS4O95619 227 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 GNA11P29992 359 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 MNS1Q8NEH6 495 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 TSGA10IPQ3SY00 556 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCAF4-202ENST00000399804 KCNH3Q9ULD8 1083 aa16.03■□□□□ 0.16
SCAF4-202ENST00000399804 SH2B2O14492 632 aaPredicted RBP16.02■□□□□ 0.16
SCAF4-202ENST00000399804 ZNF202O95125 648 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
SCAF4-202ENST00000399804 CARMIL3Q8ND23 1372 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 RRP9O43818 475 aaKnown RBP16.02■□□□□ 0.16
SCAF4-202ENST00000399804 MMP10P09238 476 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 STAT6P42226 847 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 TNNI2P48788 182 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 RC3H1Q5TC82 1133 aaKnown RBP16.02■□□□□ 0.16
SCAF4-202ENST00000399804 LARGE2Q8N3Y3 721 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 SLC4A9Q96Q91 983 aa16.02■□□□□ 0.16
SCAF4-202ENST00000399804 ELP1O95163 1332 aa16.02■□□□□ 0.15
SCAF4-202ENST00000399804 PPEF1O14829 653 aaPredicted RBP16.02■□□□□ 0.15
SCAF4-202ENST00000399804 ARID4AP29374 1257 aaPredicted RBP16.02■□□□□ 0.15
SCAF4-202ENST00000399804 PNMA1Q8ND90 353 aa16.02■□□□□ 0.15
SCAF4-202ENST00000399804 PYM1Q9BRP8 204 aaKnown RBP16.02■□□□□ 0.15
SCAF4-202ENST00000399804 NAP1L1P55209 391 aaKnown RBP16.01■□□□□ 0.15
SCAF4-202ENST00000399804 SF3B3Q15393 1217 aaKnown RBP16.01■□□□□ 0.15
SCAF4-202ENST00000399804 TEKT1Q969V4 418 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 AIFM3Q96NN9 605 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 XRN1Q8IZH2 1706 aaKnown RBP16.01■□□□□ 0.15
SCAF4-202ENST00000399804 ADRA2BP18089 450 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 CPLX3Q8WVH0 158 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 KIF1AQ12756 1690 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 POLD1P28340 1107 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 ADALQ6DHV7 355 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 GJB4Q9NTQ9 266 aa16.01■□□□□ 0.15
SCAF4-202ENST00000399804 ZNHIT6Q9NWK9 470 aaKnown RBP16.01■□□□□ 0.15
SCAF4-202ENST00000399804 CCP110O43303 1012 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 USP17L8P0C7I0 530 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
SCAF4-202ENST00000399804 PPIP5K2O43314 1243 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 UBASH3AP57075 661 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 LETM2Q2VYF4 491 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 DTHD1Q6ZMT9 781 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 BCL9O00512 1426 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 POLR2DO15514 142 aaKnown RBP16■□□□□ 0.15
SCAF4-202ENST00000399804 BAG6P46379 1132 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 PLIN2Q99541 437 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 PCDHA7Q9UN72 937 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 CUTAO60888 179 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 ZKSCAN5Q9Y2L8 839 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 CLIC4Q9Y696 253 aa16■□□□□ 0.15
SCAF4-202ENST00000399804 LIFRP42702 1097 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 AMPD3Q01432 767 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 RRAGBQ5VZM2 374 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 CCDC112Q8NEF3 446 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 CBX8Q9HC52 389 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 PCP11498 1178 aaKnown RBP15.99■□□□□ 0.15
SCAF4-202ENST00000399804 CYB5R4Q7L1T6 521 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 IQUBQ8NA54 791 aa15.99■□□□□ 0.15
SCAF4-202ENST00000399804 ABCC12Q96J65 1359 aa15.98■□□□□ 0.15
SCAF4-202ENST00000399804 MB21D2Q8IYB1 491 aaPredicted RBP15.98■□□□□ 0.15
SCAF4-202ENST00000399804 GOLGA8HP0CJ92 632 aa15.98■□□□□ 0.15
SCAF4-202ENST00000399804 DBNDD1Q9H9R9 158 aa15.98■□□□□ 0.15
SCAF4-202ENST00000399804 A0A0G2JLW4 131 aa15.98■□□□□ 0.15
SCAF4-202ENST00000399804 STX17P56962 302 aa15.98■□□□□ 0.15
SCAF4-202ENST00000399804 RESTQ13127 1097 aa15.98■□□□□ 0.15
SCAF4-202ENST00000399804 DYNLL2Q96FJ2 89 aa15.98■□□□□ 0.15
SCAF4-202ENST00000399804 C16orf45Q96MC5 204 aaPredicted RBP15.98■□□□□ 0.15
SCAF4-202ENST00000399804 GSDMDP57764 484 aa15.97■□□□□ 0.15
SCAF4-202ENST00000399804 JAKMIP3Q5VZ66 844 aa15.97■□□□□ 0.15
SCAF4-202ENST00000399804 TRMT1LQ7Z2T5 733 aaKnown RBP15.97■□□□□ 0.15
SCAF4-202ENST00000399804 CNKSR1Q969H4 720 aa15.97■□□□□ 0.15
SCAF4-202ENST00000399804 NEDD4P46934 1319 aa15.97■□□□□ 0.15
SCAF4-202ENST00000399804 IFNAR1P17181 557 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms