RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PDE6AP16499 860 aa30.72■■■□□ 2.51
U2AF1-203ENST00000398137 CYP7A1P22680 504 aa30.72■■■□□ 2.51
U2AF1-203ENST00000398137 PPATQ06203 517 aa30.72■■■□□ 2.51
U2AF1-203ENST00000398137 OTOP1Q7RTM1 612 aa30.72■■■□□ 2.51
U2AF1-203ENST00000398137 KBTBD3Q8NAB2 608 aa30.72■■■□□ 2.51
U2AF1-203ENST00000398137 BTBD19C9JJ37 291 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 IGSF3O75054 1194 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 LDHCP07864 332 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 SOX10P56693 466 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 PICALMQ13492 652 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 SLC9C2Q5TAH2 1124 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 ADGRA1Q86SQ6 560 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 CD99L2Q8TCZ2 262 aa30.71■■■□□ 2.51
U2AF1-203ENST00000398137 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.71■■■□□ 2.51
U2AF1-203ENST00000398137 CETPP11597 493 aa30.7■■■□□ 2.51
U2AF1-203ENST00000398137 SNAPC2Q13487 334 aa30.7■■■□□ 2.51
U2AF1-203ENST00000398137 MOGSQ13724 837 aa30.7■■■□□ 2.51
U2AF1-203ENST00000398137 FSD1Q9BTV5 496 aa30.7■■■□□ 2.51
U2AF1-203ENST00000398137 MYH7P12883 1935 aa30.69■■■□□ 2.5
U2AF1-203ENST00000398137 TAF1CQ15572 869 aaPredicted RBP30.69■■■□□ 2.5
U2AF1-203ENST00000398137 TTC22Q5TAA0 569 aa30.69■■■□□ 2.5
U2AF1-203ENST00000398137 KCNH4Q9UQ05 1017 aa30.69■■■□□ 2.5
U2AF1-203ENST00000398137 TRIM17Q9Y577 477 aa30.69■■■□□ 2.5
U2AF1-203ENST00000398137 ZSWIM8A7E2V4 1837 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 PHIPQ8WWQ0 1821 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 CDK5RAP2Q96SN8 1893 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 TRIM6-TRIM34B2RNG4 842 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 NPM3O75607 178 aaKnown RBP30.68■■■□□ 2.5
U2AF1-203ENST00000398137 CHGBP05060 677 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 SP3Q02447 781 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 MLLT1Q03111 559 aaPredicted RBP30.68■■■□□ 2.5
U2AF1-203ENST00000398137 SLFNL1Q499Z3 407 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 EVI5LQ96CN4 794 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 CENPFP49454 3210 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 ZNF532Q9HCE3 1301 aa30.68■■■□□ 2.5
U2AF1-203ENST00000398137 ADD2P35612 726 aa30.67■■■□□ 2.5
U2AF1-203ENST00000398137 TNRC18O15417 2968 aaPredicted RBP30.66■■■□□ 2.5
U2AF1-203ENST00000398137 DOCK1Q14185 1865 aa30.66■■■□□ 2.5
U2AF1-203ENST00000398137 TCRBV5S4A2TA0A5A2 114 aa30.66■■■□□ 2.5
U2AF1-203ENST00000398137 GSPT1P15170 499 aaKnown RBP30.66■■■□□ 2.5
U2AF1-203ENST00000398137 ZSCAN29Q8IWY8 852 aaPredicted RBP30.66■■■□□ 2.5
U2AF1-203ENST00000398137 RILPL2Q969X0 211 aa30.66■■■□□ 2.5
U2AF1-203ENST00000398137 ERO1AQ96HE7 468 aa30.66■■■□□ 2.5
U2AF1-203ENST00000398137 ZFYVE28Q9HCC9 887 aa30.66■■■□□ 2.5
U2AF1-203ENST00000398137 SIPA1L1O43166 1804 aa30.66■■■□□ 2.5
U2AF1-203ENST00000398137 ZSCAN25Q6NSZ9 544 aa30.65■■■□□ 2.5
U2AF1-203ENST00000398137 TMED8Q6PL24 325 aaPredicted RBP30.65■■■□□ 2.5
U2AF1-203ENST00000398137 MIGA1Q8NAN2 632 aa30.65■■■□□ 2.5
U2AF1-203ENST00000398137 NOL10Q9BSC4 688 aaKnown RBP30.65■■■□□ 2.5
U2AF1-203ENST00000398137 ZCCHC17Q9NP64 241 aaKnown RBP30.65■■■□□ 2.5
U2AF1-203ENST00000398137 AATFQ9NY61 560 aaKnown RBP eCLIP30.65■■■□□ 2.5
U2AF1-203ENST00000398137 PTPRFP10586 1907 aa30.65■■■□□ 2.5
U2AF1-203ENST00000398137 SCYL3Q8IZE3 742 aa30.64■■■□□ 2.5
U2AF1-203ENST00000398137 FOCADQ5VW36 1801 aa30.63■■■□□ 2.49
U2AF1-203ENST00000398137 COL2A1P02458 1487 aaPredicted RBP30.63■■■□□ 2.49
U2AF1-203ENST00000398137 SH3RF3Q8TEJ3 882 aaPredicted RBP30.63■■■□□ 2.49
U2AF1-203ENST00000398137 FAM196BA6NMK8 535 aa30.62■■■□□ 2.49
U2AF1-203ENST00000398137 RNF113AO15541 343 aaKnown RBP30.62■■■□□ 2.49
U2AF1-203ENST00000398137 TLR2O60603 784 aa30.62■■■□□ 2.49
U2AF1-203ENST00000398137 DYNLL1P63167 89 aaKnown RBP30.62■■■□□ 2.49
U2AF1-203ENST00000398137 UBE3CQ15386 1083 aa30.62■■■□□ 2.49
U2AF1-203ENST00000398137 OSBPL5Q9H0X9 879 aaPredicted RBP30.62■■■□□ 2.49
U2AF1-203ENST00000398137 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.62■■■□□ 2.49
U2AF1-203ENST00000398137 PTPN22Q9Y2R2 807 aa30.62■■■□□ 2.49
U2AF1-203ENST00000398137 BAG3O95817 575 aa30.61■■■□□ 2.49
U2AF1-203ENST00000398137 PTPRAP18433 802 aa30.61■■■□□ 2.49
U2AF1-203ENST00000398137 GTF3C3Q9Y5Q9 886 aa30.61■■■□□ 2.49
U2AF1-203ENST00000398137 TBC1D12O60347 775 aa30.6■■■□□ 2.49
U2AF1-203ENST00000398137 ZFYP08048 801 aaPredicted RBP30.6■■■□□ 2.49
U2AF1-203ENST00000398137 LRRFIP1Q32MZ4 808 aaKnown RBP30.6■■■□□ 2.49
U2AF1-203ENST00000398137 GPAT2Q6NUI2 795 aa30.6■■■□□ 2.49
U2AF1-203ENST00000398137 ANKRD23Q86SG2 305 aa30.6■■■□□ 2.49
U2AF1-203ENST00000398137 ADGRA2Q96PE1 1338 aa30.6■■■□□ 2.49
U2AF1-203ENST00000398137 EFCC1Q9HA90 598 aa30.6■■■□□ 2.49
U2AF1-203ENST00000398137 MAGEB6P1A0A0J9YX57 407 aa30.59■■■□□ 2.49
U2AF1-203ENST00000398137 PPP4CP60510 307 aa30.59■■■□□ 2.49
U2AF1-203ENST00000398137 TEX11Q8IYF3 940 aa30.59■■■□□ 2.49
U2AF1-203ENST00000398137 AFG3L2Q9Y4W6 797 aa30.59■■■□□ 2.49
U2AF1-203ENST00000398137 ZHX2Q9Y6X8 837 aa30.59■■■□□ 2.49
U2AF1-203ENST00000398137 BRCA2P51587 3418 aa30.58■■■□□ 2.49
U2AF1-203ENST00000398137 CXCL11O14625 94 aa30.58■■■□□ 2.49
U2AF1-203ENST00000398137 PLCG2P16885 1265 aa30.58■■■□□ 2.49
U2AF1-203ENST00000398137 SDSP20132 328 aa30.58■■■□□ 2.49
U2AF1-203ENST00000398137 RRP1BQ14684 758 aaKnown RBP30.58■■■□□ 2.49
U2AF1-203ENST00000398137 CCDC84Q86UT8 332 aaPredicted RBP30.58■■■□□ 2.49
U2AF1-203ENST00000398137 RIOK1Q9BRS2 568 aaKnown RBP30.58■■■□□ 2.49
U2AF1-203ENST00000398137 ARHGAP39Q9C0H5 1083 aa30.58■■■□□ 2.49
U2AF1-203ENST00000398137 ATAD5Q96QE3 1844 aa30.58■■■□□ 2.49
U2AF1-203ENST00000398137 PDHXO00330 501 aa30.57■■■□□ 2.48
U2AF1-203ENST00000398137 CTNND1O60716 968 aaKnown RBP30.57■■■□□ 2.48
U2AF1-203ENST00000398137 C17orf99Q6UX52 265 aa30.57■■■□□ 2.48
U2AF1-203ENST00000398137 APPBP2Q92624 585 aa30.57■■■□□ 2.48
U2AF1-203ENST00000398137 MBD4O95243 580 aa30.56■■■□□ 2.48
U2AF1-203ENST00000398137 LCORLQ8N3X6 602 aa30.56■■■□□ 2.48
U2AF1-203ENST00000398137 PUS7LQ9H0K6 701 aaKnown RBP30.56■■■□□ 2.48
U2AF1-203ENST00000398137 A0A0G2JLL6 359 aaPredicted RBP30.55■■■□□ 2.48
U2AF1-203ENST00000398137 CTGFP29279 349 aa30.55■■■□□ 2.48
U2AF1-203ENST00000398137 PRRT2Q7Z6L0 340 aaPredicted RBP30.55■■■□□ 2.48
U2AF1-203ENST00000398137 OSBP2Q969R2 916 aa30.55■■■□□ 2.48
U2AF1-203ENST00000398137 ARMT1Q9H993 441 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms