RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 TBC1D8O95759 1140 aa15.73■□□□□ 0.11
COL6A2-203ENST00000397763 ATF3P18847 181 aa15.73■□□□□ 0.11
COL6A2-203ENST00000397763 LMAN1P49257 510 aa15.73■□□□□ 0.11
COL6A2-203ENST00000397763 EPSTI1Q96J88 318 aa15.73■□□□□ 0.11
COL6A2-203ENST00000397763 RNF216Q9NWF9 866 aaPredicted RBP15.73■□□□□ 0.11
COL6A2-203ENST00000397763 BAZ2BQ9UIF8 2168 aaKnown RBP15.73■□□□□ 0.11
COL6A2-203ENST00000397763 ARHGAP6O43182 974 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 ZSCAN12O43309 604 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 NOM1Q5C9Z4 860 aaKnown RBP15.72■□□□□ 0.11
COL6A2-203ENST00000397763 NOSTRINQ8IVI9 506 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 NAPBQ9H115 298 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 EPB41L4AQ9HCS5 686 aaPredicted RBP15.72■□□□□ 0.11
COL6A2-203ENST00000397763 USP54Q70EL1 1684 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 CPDO75976 1380 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 FER1L4A9Z1Z3 1794 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 PPP6R2O75170 966 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 MCM6Q14566 821 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 PRDM11Q9NQV5 511 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 TRIM66O15016 1216 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 CDC25AP30304 524 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 SPECC1LQ69YQ0 1117 aa15.72■□□□□ 0.11
COL6A2-203ENST00000397763 CC2D1AQ6P1N0 951 aaPredicted RBP15.72■□□□□ 0.11
COL6A2-203ENST00000397763 CUTAO60888 179 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 CDKL5O76039 1030 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 TTLL11Q8NHH1 800 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 CSRNP2Q9H175 543 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL6A2-203ENST00000397763 TBC1D2BQ9UPU7 963 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 SLIT3O75094 1523 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 SCN11AQ9UI33 1791 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 EFCAB8A8MWE9 144 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 CCT6AP40227 531 aaKnown RBP15.71■□□□□ 0.11
COL6A2-203ENST00000397763 MDM2Q00987 491 aaPredicted RBP15.71■□□□□ 0.11
COL6A2-203ENST00000397763 SMC1AQ14683 1233 aaKnown RBP15.71■□□□□ 0.11
COL6A2-203ENST00000397763 SKIDA1Q1XH10 827 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 ISCA1Q9BUE6 129 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 FEZ2Q9UHY8 353 aaPredicted RBP15.71■□□□□ 0.11
COL6A2-203ENST00000397763 MAPK8IP1Q9UQF2 711 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 RIPOR2Q9Y4F9 1068 aa15.71■□□□□ 0.11
COL6A2-203ENST00000397763 A0A087X0B3 334 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 WNT7AO00755 349 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 EARS2Q5JPH6 523 aaKnown RBP15.7■□□□□ 0.1
COL6A2-203ENST00000397763 RAD9BQ6WBX8 426 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 RHOXF2BP0C7M4 288 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 RBL2Q08999 1139 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 FBXL16Q8N461 479 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 STRBPQ96SI9 672 aaKnown RBP15.7■□□□□ 0.1
COL6A2-203ENST00000397763 RHOXF2Q9BQY4 288 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 VPS54Q9P1Q0 977 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 TRMT112Q9UI30 125 aaKnown RBP15.7■□□□□ 0.1
COL6A2-203ENST00000397763 PHACTR2O75167 634 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
COL6A2-203ENST00000397763 TDO2P48775 406 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 SLC4A8Q2Y0W8 1093 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 IFNL3Q8IZI9 196 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 HINFPQ9BQA5 517 aa15.7■□□□□ 0.1
COL6A2-203ENST00000397763 FBXO2Q9UK22 296 aaPredicted RBP15.7■□□□□ 0.1
COL6A2-203ENST00000397763 C1orf167Q5SNV9 1468 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 MAP3K9P80192 1104 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 SAFBQ15424 915 aaKnown RBP eCLIP15.69■□□□□ 0.1
COL6A2-203ENST00000397763 ACRBPQ8NEB7 543 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 IPO4Q8TEX9 1081 aaKnown RBP15.69■□□□□ 0.1
COL6A2-203ENST00000397763 EEF2KMTQ96G04 330 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 CDC5LQ99459 802 aaKnown RBP15.69■□□□□ 0.1
COL6A2-203ENST00000397763 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 CCP110O43303 1012 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 GPS2Q13227 327 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 ZSCAN26Q16670 478 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 KIF6Q6ZMV9 814 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 LCMT1Q9UIC8 334 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 MRFAP1Q9Y605 127 aa15.69■□□□□ 0.1
COL6A2-203ENST00000397763 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
COL6A2-203ENST00000397763 ZNF569Q5MCW4 686 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 KIFC2Q96AC6 838 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 RSPH14Q9UHP6 348 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 TFR2Q9UP52 801 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 CYP2D7A0A087X1C5 515 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 H3BQF6 201 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
COL6A2-203ENST00000397763 TBX2Q13207 712 aaPredicted RBP15.68■□□□□ 0.1
COL6A2-203ENST00000397763 RTN1Q16799 776 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 LCORLQ8N3X6 602 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 IGSF22Q8N9C0 903 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 SDR42E1Q8WUS8 393 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 ARFGAP3Q9NP61 516 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 TULP2O00295 520 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 N4BP1O75113 896 aaKnown RBP15.68■□□□□ 0.1
COL6A2-203ENST00000397763 MMP1P03956 469 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 MFSD6Q6ZSS7 791 aa15.68■□□□□ 0.1
COL6A2-203ENST00000397763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL6A2-203ENST00000397763 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
COL6A2-203ENST00000397763 KCNJ6P48051 423 aa15.67■□□□□ 0.1
COL6A2-203ENST00000397763 TXLNBQ8N3L3 684 aa15.67■□□□□ 0.1
COL6A2-203ENST00000397763 MYO5AQ9Y4I1 1855 aaKnown RBP15.67■□□□□ 0.1
COL6A2-203ENST00000397763 CASP14P31944 242 aa15.67■□□□□ 0.1
COL6A2-203ENST00000397763 ZNF174Q15697 407 aa15.67■□□□□ 0.1
COL6A2-203ENST00000397763 GPIHBP1Q8IV16 184 aa15.67■□□□□ 0.1
COL6A2-203ENST00000397763 SHISA4Q96DD7 197 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms