RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
LSS-202ENST00000397728 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
LSS-202ENST00000397728 NCBP1Q09161 790 aaKnown RBP17.51■□□□□ 0.39
LSS-202ENST00000397728 DIS3L2Q8IYB7 885 aaKnown RBP17.51■□□□□ 0.39
LSS-202ENST00000397728 ZNF654Q8IZM8 581 aa17.51■□□□□ 0.39
LSS-202ENST00000397728 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 ADCY7P51828 1080 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 EZH2Q15910 746 aaKnown RBP17.5■□□□□ 0.39
LSS-202ENST00000397728 PNMA1Q8ND90 353 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 RMND1Q9NWS8 449 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 VWA3AA6NCI4 1184 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 ALAS1P13196 640 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 LINC00116Q8NCU8 138 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 UIMC1Q96RL1 719 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 FLOT1O75955 427 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 GINS2Q9Y248 185 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 TNKSO95271 1327 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 MED14O60244 1454 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 SYT1P21579 422 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 ARID4AP29374 1257 aaPredicted RBP17.5■□□□□ 0.39
LSS-202ENST00000397728 PABPC4Q13310 644 aaKnown RBP eCLIP17.5■□□□□ 0.39
LSS-202ENST00000397728 AOC3Q16853 763 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 KIAA1328Q86T90 577 aa17.5■□□□□ 0.39
LSS-202ENST00000397728 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
LSS-202ENST00000397728 NAP1L4Q99733 375 aaKnown RBP17.5■□□□□ 0.39
LSS-202ENST00000397728 FRMPD2Q68DX3 1309 aaPredicted RBP17.5■□□□□ 0.39
LSS-202ENST00000397728 FAM13AO94988 1023 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 SASH1O94885 1247 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 HSPA4P34932 840 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 GPS2Q13227 327 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 PPP2R5BQ15173 497 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 TDRD12Q587J7 1177 aaKnown RBP17.49■□□□□ 0.39
LSS-202ENST00000397728 VPS36Q86VN1 386 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 SPICE1Q8N0Z3 855 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 ISCA1Q9BUE6 129 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 STX1AQ16623 288 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 RC3H1Q5TC82 1133 aaKnown RBP17.49■□□□□ 0.39
LSS-202ENST00000397728 FAM43AQ8N2R8 423 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 GOLGA8HP0CJ92 632 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 ZNF165P49910 485 aa17.49■□□□□ 0.39
LSS-202ENST00000397728 MST1RQ04912 1400 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 BCORL1Q5H9F3 1711 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 TOP1P11387 765 aaKnown RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 INTS4Q96HW7 963 aaKnown RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 SERPINB13Q9UIV8 391 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 ABT1Q9ULW3 272 aaKnown RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 DCCP43146 1447 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 DDX39AO00148 427 aaKnown RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 ITPK1Q13572 414 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 TBC1D10BQ4KMP7 808 aaPredicted RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 MIGA2Q7L4E1 593 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 PUF60Q9UHX1 559 aaKnown RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 CCNT1O60563 726 aaKnown RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 GDF11O95390 407 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 SFPQP23246 707 aaKnown RBP eCLIP17.48■□□□□ 0.39
LSS-202ENST00000397728 RILPL1Q5EBL4 403 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 CMTR1Q8N1G2 835 aaKnown RBP17.48■□□□□ 0.39
LSS-202ENST00000397728 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
LSS-202ENST00000397728 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
LSS-202ENST00000397728 PHACTR2O75167 634 aa17.47■□□□□ 0.39
LSS-202ENST00000397728 TXKP42681 527 aa17.47■□□□□ 0.39
LSS-202ENST00000397728 GIMAP6Q6P9H5 292 aa17.47■□□□□ 0.39
LSS-202ENST00000397728 CCDC17Q96LX7 622 aa17.47■□□□□ 0.39
LSS-202ENST00000397728 NONOQ15233 471 aaKnown RBP eCLIP17.47■□□□□ 0.394e-8■■■■■ 32.2
LSS-202ENST00000397728 ARHGAP29Q52LW3 1261 aa17.47■□□□□ 0.39
LSS-202ENST00000397728 NUP88Q99567 741 aaPredicted RBP17.47■□□□□ 0.39
LSS-202ENST00000397728 RUFY1Q96T51 708 aa17.47■□□□□ 0.39
LSS-202ENST00000397728 TMEM232C9JQI7 657 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 PRKAB2O43741 272 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 NEBLO76041 1014 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 CACNB3P54284 484 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 KIF22Q14807 665 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 HSP90AA4PQ58FG1 418 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 ZMYM1Q5SVZ6 1142 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 FAM212AQ96EL1 285 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 MECOMQ03112 1051 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 PODNQ7Z5L7 613 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 FAM114A1Q8IWE2 563 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 VPS54Q9P1Q0 977 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 KCNJ14Q9UNX9 436 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 IQSEC2Q5JU85 1478 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 SPA17Q15506 151 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 CD209Q9NNX6 404 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 MYO3AQ8NEV4 1616 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 ECE2O60344 883 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 ADD2P35612 726 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
LSS-202ENST00000397728 REXO1Q8N1G1 1221 aaKnown RBP17.46■□□□□ 0.39
LSS-202ENST00000397728 STAP2Q9UGK3 403 aa17.46■□□□□ 0.39
LSS-202ENST00000397728 PSMA7O14818 248 aa17.45■□□□□ 0.38
LSS-202ENST00000397728 USP37Q86T82 979 aa17.45■□□□□ 0.38
LSS-202ENST00000397728 ANKRD35Q8N283 1001 aa17.45■□□□□ 0.38
LSS-202ENST00000397728 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
LSS-202ENST00000397728 CDHR2Q9BYE9 1310 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms