RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 ARHGAP24Q8N264 748 aa16.75■□□□□ 0.27
CHL1-202ENST00000397491 FAM184BQ9ULE4 1060 aa16.75■□□□□ 0.27
CHL1-202ENST00000397491 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
CHL1-202ENST00000397491 GNAQP50148 359 aa16.75■□□□□ 0.27
CHL1-202ENST00000397491 FERMT1Q9BQL6 677 aa16.75■□□□□ 0.27
CHL1-202ENST00000397491 LUC7L3O95232 432 aaKnown RBP16.74■□□□□ 0.27
CHL1-202ENST00000397491 VWA3BQ502W6 1294 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 NUP160Q12769 1436 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 SMIM24O75264 130 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 CALM1P0DP23 149 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 CALM2P0DP24 149 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 CALM3P0DP25 149 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 CFAP157Q5JU67 520 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 DIS3L2Q8IYB7 885 aaKnown RBP16.74■□□□□ 0.27
CHL1-202ENST00000397491 N4BP2L2Q92802 583 aaPredicted RBP16.74■□□□□ 0.27
CHL1-202ENST00000397491 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 TM6SF1Q9BZW5 370 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 TRIM4Q9C037 500 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 HELLSQ9NRZ9 838 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 PFKFB1P16118 471 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 RPUSD2Q8IZ73 545 aaKnown RBP16.74■□□□□ 0.27
CHL1-202ENST00000397491 FANCAO15360 1455 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 CASQ2O14958 399 aaPredicted RBP16.74■□□□□ 0.27
CHL1-202ENST00000397491 PPP1R2P41236 205 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 RPS6KA1Q15418 735 aa16.74■□□□□ 0.27
CHL1-202ENST00000397491 CRNKL1Q9BZJ0 848 aaKnown RBP16.74■□□□□ 0.27
CHL1-202ENST00000397491 LRRD1A4D1F6 860 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 ZNF622Q969S3 477 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHL1-202ENST00000397491 PARD6BQ9BYG5 372 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 RGS16O15492 202 aaPredicted RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 MAGEA9P43362 315 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 TPD52P55327 224 aaPredicted RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 PDE1CQ14123 709 aaPredicted RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 DENND2CQ68D51 928 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 CCDC97Q96F63 343 aaPredicted RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 COMMD10Q9Y6G5 202 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 CUL7Q14999 1698 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 INSRP06213 1382 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 PHLPP2Q6ZVD8 1323 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 ANKRD65E5RJM6 399 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 SPOPO43791 374 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 RASSF2P50749 326 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 MAP7Q14244 749 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 TRIM58Q8NG06 486 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 BICD1Q96G01 975 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 RAB3IPQ96QF0 476 aaPredicted RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 ZKSCAN3Q9BRR0 538 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 SYNCQ9H7C4 482 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 PNMA6EA0A0J9YXQ4 647 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 STX10O60499 249 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 TYW1BQ6NUM6 668 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 ANKRD42Q8N9B4 389 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 DDX23Q9BUQ8 820 aaKnown RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 ANKIB1Q9P2G1 1089 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 CCDC151A5D8V7 595 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 RAD51AP2Q09MP3 1159 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
CHL1-202ENST00000397491 C6orf50Q9HD87 102 aa16.73■□□□□ 0.27
CHL1-202ENST00000397491 ADAMTS2O95450 1211 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 SNRPA1P09661 255 aaKnown RBP16.72■□□□□ 0.27
CHL1-202ENST00000397491 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
CHL1-202ENST00000397491 ASIC2Q16515 512 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 HHATQ5VTY9 493 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 OR8K1Q8NGG5 319 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 NELFBQ8WX92 580 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 GYS2P54840 703 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 MMS22LQ6ZRQ5 1243 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 EHMT1Q9H9B1 1298 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 KLHL14Q9P2G3 628 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
CHL1-202ENST00000397491 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 SV2BQ7L1I2 683 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 USP37Q86T82 979 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 FCHSD1Q86WN1 690 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 RGS12O14924 1447 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 PLCD1P51178 756 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 RASIP1Q5U651 963 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 GBP7Q8N8V2 638 aaPredicted RBP16.72■□□□□ 0.27
CHL1-202ENST00000397491 FBXO18Q8NFZ0 1043 aa16.72■□□□□ 0.27
CHL1-202ENST00000397491 DIXDC1Q155Q3 683 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 SH2D4BQ5SQS7 431 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 KRT40Q6A162 431 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 STAMQ92783 540 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 SERTAD1Q9UHV2 236 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 DEXIO95424 95 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 STX2P32856 288 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 HSPA1LP34931 641 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 MYSM1Q5VVJ2 828 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 TPCN1Q9ULQ1 816 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 HYOU1Q9Y4L1 999 aa16.71■□□□□ 0.27
CHL1-202ENST00000397491 B4E1Z4 1266 aa16.71■□□□□ 0.26
CHL1-202ENST00000397491 IRX5P78411 483 aaPredicted RBP16.71■□□□□ 0.26
CHL1-202ENST00000397491 HS2ST1Q7LGA3 356 aa16.71■□□□□ 0.26
CHL1-202ENST00000397491 HAUS4Q9H6D7 363 aa16.71■□□□□ 0.26
CHL1-202ENST00000397491 ASIC3Q9UHC3 531 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms