RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 CHMLP26374 656 aa22.99■■□□□ 1.27
HOXA9-202ENST00000396345 ZNF157P51786 506 aaPredicted RBP22.99■■□□□ 1.27
HOXA9-202ENST00000396345 MFAP1P55081 439 aaKnown RBP22.99■■□□□ 1.27
HOXA9-202ENST00000396345 AMOTL1Q8IY63 956 aa22.99■■□□□ 1.27
HOXA9-202ENST00000396345 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.99■■□□□ 1.27
HOXA9-202ENST00000396345 TRIM34Q9BYJ4 488 aa22.99■■□□□ 1.27
HOXA9-202ENST00000396345 ZNF112Q9UJU3 913 aa22.99■■□□□ 1.27
HOXA9-202ENST00000396345 FAM196BA6NMK8 535 aa22.98■■□□□ 1.27
HOXA9-202ENST00000396345 PLCD1P51178 756 aa22.98■■□□□ 1.27
HOXA9-202ENST00000396345 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.98■■□□□ 1.27
HOXA9-202ENST00000396345 ZNF589Q86UQ0 364 aaPredicted RBP22.98■■□□□ 1.27
HOXA9-202ENST00000396345 METTL16Q86W50 562 aaKnown RBP22.98■■□□□ 1.27
HOXA9-202ENST00000396345 NACAP1Q9BZK3 213 aa22.98■■□□□ 1.27
HOXA9-202ENST00000396345 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.98■■□□□ 1.27
HOXA9-202ENST00000396345 CCDC171Q6TFL3 1326 aa22.98■■□□□ 1.27
HOXA9-202ENST00000396345 OTOFQ9HC10 1997 aa22.98■■□□□ 1.27
HOXA9-202ENST00000396345 USP17L12C9JPN9 530 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 USP17L21D6R901 530 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 CYP2D6P10635 497 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 TDO2P48775 406 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 IFFO2Q5TF58 517 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 CYP4F22Q6NT55 531 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 CTR9Q6PD62 1173 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 IFNL3Q8IZI9 196 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 SLC10A4Q96EP9 437 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 CLMNQ96JQ2 1002 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 EHD4Q9H223 541 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 EPB41L4AQ9HCS5 686 aaPredicted RBP22.97■■□□□ 1.27
HOXA9-202ENST00000396345 CSADQ9Y600 493 aa22.97■■□□□ 1.27
HOXA9-202ENST00000396345 PHF20L1A8MW92 1017 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 INPP5BP32019 993 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 ECE1P42892 770 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 GRM1Q13255 1194 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 VGLL4Q14135 290 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 JMYQ8N9B5 988 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 RUFY2Q8WXA3 655 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 ZKSCAN4Q969J2 545 aaPredicted RBP22.96■■□□□ 1.27
HOXA9-202ENST00000396345 CCDC102AQ96A19 550 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 ARPP21Q9UBL0 812 aaPredicted RBP22.96■■□□□ 1.27
HOXA9-202ENST00000396345 SERPINB13Q9UIV8 391 aa22.96■■□□□ 1.27
HOXA9-202ENST00000396345 CYP2D7A0A087X1C5 515 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 VEGFBP49765 207 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 SBK1Q52WX2 424 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 C12orf60Q5U649 245 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 VPS53Q5VIR6 699 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 CAPNS2Q96L46 248 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 NAPBQ9H115 298 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 ELP3Q9H9T3 547 aa22.95■■□□□ 1.26
HOXA9-202ENST00000396345 FOXP2O15409 715 aa22.94■■□□□ 1.26
HOXA9-202ENST00000396345 EVX2Q03828 476 aa22.94■■□□□ 1.26
HOXA9-202ENST00000396345 RASAL3Q86YV0 1011 aa22.94■■□□□ 1.26
HOXA9-202ENST00000396345 DNAJC18Q9H819 358 aa22.94■■□□□ 1.26
HOXA9-202ENST00000396345 RAD50Q92878 1312 aa22.93■■□□□ 1.26
HOXA9-202ENST00000396345 WDR33Q9C0J8 1336 aaKnown RBP22.93■■□□□ 1.26
HOXA9-202ENST00000396345 MINDY4BA8MYZ0 360 aa22.93■■□□□ 1.26
HOXA9-202ENST00000396345 CTNND1O60716 968 aaKnown RBP22.93■■□□□ 1.26
HOXA9-202ENST00000396345 SLC10A3P09131 477 aa22.93■■□□□ 1.26
HOXA9-202ENST00000396345 HSPD1P10809 573 aaKnown RBP22.93■■□□□ 1.26
HOXA9-202ENST00000396345 SNCAIPQ9Y6H5 919 aa22.93■■□□□ 1.26
HOXA9-202ENST00000396345 GABPAQ06546 454 aa22.92■■□□□ 1.26
HOXA9-202ENST00000396345 ALX1Q15699 326 aa22.92■■□□□ 1.26
HOXA9-202ENST00000396345 NOL9Q5SY16 702 aaKnown RBP22.92■■□□□ 1.26
HOXA9-202ENST00000396345 DYNLL2Q96FJ2 89 aa22.92■■□□□ 1.26
HOXA9-202ENST00000396345 FAM155AB1AL88 458 aaPredicted RBP22.91■■□□□ 1.26
HOXA9-202ENST00000396345 RRP1BQ14684 758 aaKnown RBP22.91■■□□□ 1.26
HOXA9-202ENST00000396345 SCYL3Q8IZE3 742 aa22.91■■□□□ 1.26
HOXA9-202ENST00000396345 IL25Q9H293 177 aa22.91■■□□□ 1.26
HOXA9-202ENST00000396345 SWAP70Q9UH65 585 aa22.91■■□□□ 1.26
HOXA9-202ENST00000396345 TAOK2Q9UL54 1235 aa22.91■■□□□ 1.26
HOXA9-202ENST00000396345 GTF3C3Q9Y5Q9 886 aa22.91■■□□□ 1.26
HOXA9-202ENST00000396345 SMIM22K7EJ46 135 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 SGSM2O43147 1006 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 SHMT1P34896 483 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 CAP2P40123 477 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 SPRYD7Q5W111 196 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 TATDN1Q6P1N9 297 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 ERO1BQ86YB8 467 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 WNK4Q96J92 1243 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 PICK1Q9NRD5 415 aa22.9■■□□□ 1.26
HOXA9-202ENST00000396345 LAMB1P07942 1786 aa22.89■■□□□ 1.26
HOXA9-202ENST00000396345 AOC2O75106 756 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 CDC45O75419 566 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 FGAP02671 866 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 NOGQ13253 232 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 CERKLQ49MI3 558 aaPredicted RBP22.89■■□□□ 1.25
HOXA9-202ENST00000396345 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 C16orf86Q6ZW13 317 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 SLC44A5Q8NCS7 719 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 CNKSR2Q8WXI2 1034 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 OPTNQ96CV9 577 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 DOCK1Q14185 1865 aa22.89■■□□□ 1.25
HOXA9-202ENST00000396345 ZMYM6O95789 1325 aa22.88■■□□□ 1.25
HOXA9-202ENST00000396345 SPDYE5A6NIY4 337 aa22.88■■□□□ 1.25
HOXA9-202ENST00000396345 GDF11O95390 407 aa22.88■■□□□ 1.25
HOXA9-202ENST00000396345 ZBTB48P10074 688 aaPredicted RBP22.88■■□□□ 1.25
HOXA9-202ENST00000396345 CDK8P49336 464 aa22.88■■□□□ 1.25
HOXA9-202ENST00000396345 MKRN3Q13064 507 aaKnown RBP22.88■■□□□ 1.25
HOXA9-202ENST00000396345 DSCC1Q9BVC3 393 aa22.88■■□□□ 1.25
HOXA9-202ENST00000396345 ATAD5Q96QE3 1844 aa22.87■■□□□ 1.25
HOXA9-202ENST00000396345 GJA5P36382 358 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms