RNA–Protein interactions for RNA: ENST00000395986.6

BDNF-207, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 3,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-207ENST00000395986 AIFM3Q96NN9 605 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 HSD3B7Q9H2F3 369 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 EHD2Q9NZN4 543 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 MYOM1P52179 1685 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 SSH2Q76I76 1423 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 FER1L4A9Z1Z3 1794 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 FAM170AA1A519 330 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 ODF2Q5BJF6 829 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 KCNV2Q8TDN2 545 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 UGGT1Q9NYU2 1555 aa8.31□□□□□ -1.08
BDNF-207ENST00000395986 AGPSO00116 658 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 PIP4K2BP78356 416 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 FMR1Q06787 632 aaKnown RBP eCLIP8.3□□□□□ -1.08
BDNF-207ENST00000395986 ZKSCAN8Q15776 578 aaPredicted RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 CYB5D1Q6P9G0 228 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 B4GALNT4Q76KP1 1039 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 C3orf20Q8ND61 904 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 LBHD1Q9BQE6 289 aaPredicted RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 ECHDC1Q9NTX5 307 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 RAB21Q9UL25 225 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 MAPK8IP1Q9UQF2 711 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 CPLX1O14810 134 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 AFMP43652 599 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 CRYMQ14894 314 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 MAATS1Q7Z4T9 603 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 MSANTD4Q8NCY6 345 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 C8orf76Q96K31 380 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 SH3GL3Q99963 347 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 VPS16Q9H269 839 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 C14orf93Q9H972 538 aaKnown RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 YTHDC2Q9H6S0 1430 aaKnown RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 RIMS2Q9UQ26 1411 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 ECEL1O95672 775 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 ATP1A1P05023 1023 aaKnown RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 FNTAP49354 379 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 CEBPAP49715 358 aaPredicted RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 KSR1Q8IVT5 923 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 RNPC3Q96LT9 517 aaKnown RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
BDNF-207ENST00000395986 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 KCND1Q9NSA2 647 aa8.3□□□□□ -1.08
BDNF-207ENST00000395986 NNTQ13423 1086 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 NAA35Q5VZE5 725 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 ADALQ6DHV7 355 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 CAPRIN2Q6IMN6 1127 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 NSUN7Q8NE18 718 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 CCDC26Q8TAB7 109 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 CNGA1P29973 690 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 IDI1Q13907 227 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 DDX46Q7L014 1031 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 ILDR1Q86SU0 546 aaPredicted RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 C9orf78Q9NZ63 289 aaPredicted RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 RIMS1Q86UR5 1692 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 KLHL33A6NCF5 533 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 ARHGAP25P42331 645 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 RPUSD2Q8IZ73 545 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 LINC00301Q8NCQ3 95 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 MROH7-TTC4A0A0A0MT08 1334 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 GRIN2DO15399 1336 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 C3P01024 1663 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 SBNO1A3KN83 1393 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 C21orf2O43822 256 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 PTPROQ16827 1216 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 TBC1D1Q86TI0 1168 aaPredicted RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 FAM228AQ86W67 206 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 NGDNQ8NEJ9 315 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 ZNF473Q8WTR7 871 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 MAP4K1Q92918 833 aa8.29□□□□□ -1.08
BDNF-207ENST00000395986 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
BDNF-207ENST00000395986 A0A1B0GVG6 124 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 IPO7O95373 1038 aaKnown RBP8.28□□□□□ -1.08
BDNF-207ENST00000395986 CTDNEP1O95476 244 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 MYL6BP14649 208 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 FXR1P51114 621 aaKnown RBP eCLIP8.28□□□□□ -1.08
BDNF-207ENST00000395986 AIMP1Q12904 312 aaKnown RBP8.28□□□□□ -1.08
BDNF-207ENST00000395986 CCDC122Q5T0U0 273 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 KIAA1328Q86T90 577 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 FOXP4Q8IVH2 680 aaPredicted RBP8.28□□□□□ -1.08
BDNF-207ENST00000395986 CDK19Q9BWU1 502 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 TM6SF1Q9BZW5 370 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 CLTCQ00610 1675 aaKnown RBP8.28□□□□□ -1.08
BDNF-207ENST00000395986 CEP152O94986 1710 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 HSF2BPO75031 334 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 SNUPNO95149 360 aaKnown RBP8.28□□□□□ -1.08
BDNF-207ENST00000395986 ERCC3P19447 782 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 TMOD1P28289 359 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 USP14P54578 494 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 MICALCLQ6ZW33 695 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 TSEN2Q8NCE0 465 aaKnown RBP8.28□□□□□ -1.08
BDNF-207ENST00000395986 SMCR8Q8TEV9 937 aaPredicted RBP8.28□□□□□ -1.08
BDNF-207ENST00000395986 CCT8L2Q96SF2 557 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 CHP1Q99653 195 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 STK38LQ9Y2H1 464 aa8.28□□□□□ -1.08
BDNF-207ENST00000395986 KIAA0232Q92628 1395 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms