RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 RAB17Q9H0T7 212 aa8.86□□□□□ -0.99
TRPS1-203ENST00000395715 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
TRPS1-203ENST00000395715 CYP26C1Q6V0L0 522 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 ZNF652Q9Y2D9 606 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 KRT14P02533 472 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 NME8Q8N427 588 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 GFM2Q969S9 779 aaKnown RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 SPZ1Q9BXG8 430 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 ARHGDIAP52565 204 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 PSMC1P62191 440 aaKnown RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 TYRO3Q06418 890 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 USP48Q86UV5 1035 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 RNF34Q969K3 372 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 NR1H4Q96RI1 486 aaPredicted RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 KRT12Q99456 494 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 CNPY2Q9Y2B0 182 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 TMEM232C9JQI7 657 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 KIF1CO43896 1103 aaKnown RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 MAP3K12Q12852 859 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 SYCE1LA8MT33 242 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 MCF2LO15068 1137 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 ADAMTS2O95450 1211 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 ZKSCAN3Q9BRR0 538 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 TTF2Q9UNY4 1162 aaKnown RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 PTPRGP23470 1445 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 CAPN9O14815 690 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 NONOQ15233 471 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 DCAF17Q5H9S7 520 aaPredicted RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 METTL24Q5JXM2 366 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 PRDM11Q9NQV5 511 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 CLEC11AQ9Y240 323 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 CFAP221Q4G0U5 840 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 TRMT10CQ7L0Y3 403 aaKnown RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 MRPS27Q92552 414 aaKnown RBP8.85□□□□□ -0.99
TRPS1-203ENST00000395715 NOX5Q96PH1 765 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 CARD6Q9BX69 1037 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 BOLA2Q9H3K6 86 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 KAT14Q9H8E8 782 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 PALM2Q8IXS6 379 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 TEX11Q8IYF3 940 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 USP16Q9Y5T5 823 aa8.85□□□□□ -0.99
TRPS1-203ENST00000395715 PRIM1P49642 420 aaKnown RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 SLC8A3P57103 927 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 MICU3Q86XE3 530 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 OPTNQ96CV9 577 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 TRPC5Q9UL62 973 aaPredicted RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 SESN1Q9Y6P5 492 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 BTBD11A6QL63 1104 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 KRT7P08729 469 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 ATP1A2P50993 1020 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 SLC9A5Q14940 896 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 CCDC105Q8IYK2 499 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 AKNAD1Q5T1N1 836 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 VPS37BQ9H9H4 285 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 hCG_2014768A0A024R1R8 64 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 E2F4Q16254 413 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 TCP11Q8WWU5 503 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 TSR2Q969E8 191 aaKnown RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 ANGPTL2Q9UKU9 493 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 JRKLQ9Y4A0 524 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 VWA3BQ502W6 1294 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 GLE1Q53GS7 698 aaKnown RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 IFT122Q9HBG6 1241 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 CDV3Q9UKY7 258 aaKnown RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 ARHGAP5Q13017 1502 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 FMNL1O95466 1100 aaPredicted RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 TRPC1P48995 793 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 ZC3H12BQ5HYM0 836 aaKnown RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 TMTC3Q6ZXV5 915 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 ORC3Q9UBD5 711 aaPredicted RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 ZNF229Q9UJW7 825 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 DAB1O75553 588 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 SUN1O94901 812 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 IFIT1P09914 478 aaKnown RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 POMGNT1Q8WZA1 660 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 DACH2Q96NX9 599 aa8.84□□□□□ -0.99
TRPS1-203ENST00000395715 RRP15Q9Y3B9 282 aaKnown RBP8.84□□□□□ -0.99
TRPS1-203ENST00000395715 APOA1P02647 267 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 TRIM14Q14142 442 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 HS2ST1Q7LGA3 356 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 DACT1Q9NYF0 836 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 STX1BP61266 288 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 RCN2Q14257 317 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 BTN2A1Q7KYR7 527 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 CHMP6Q96FZ7 201 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 FAM133BQ5BKY9 247 aaKnown RBP8.83□□□□□ -1
TRPS1-203ENST00000395715 RNF207Q6ZRF8 634 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 NSMCE1Q8WV22 266 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 FGD4Q96M96 766 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 ACBD5Q5T8D3 534 aaPredicted RBP8.83□□□□□ -1
TRPS1-203ENST00000395715 LIN9Q5TKA1 542 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 RPAP2Q8IXW5 612 aaPredicted RBP8.83□□□□□ -1
TRPS1-203ENST00000395715 TTLL3Q9Y4R7 772 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 EFCAB14O75071 495 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 ZNF530Q6P9A1 599 aaPredicted RBP8.83□□□□□ -1
TRPS1-203ENST00000395715 ASZ1Q8WWH4 475 aa8.83□□□□□ -1
TRPS1-203ENST00000395715 STARD3NLO95772 234 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms