RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CTU1Q7Z7A3 348 aaKnown RBP37.27■■■■□ 3.56
CMTM4-202ENST00000394106 KCNH4Q9UQ05 1017 aa37.27■■■■□ 3.56
CMTM4-202ENST00000394106 ZHX2Q9Y6X8 837 aa37.27■■■■□ 3.56
CMTM4-202ENST00000394106 ZNF532Q9HCE3 1301 aa37.27■■■■□ 3.56
CMTM4-202ENST00000394106 SIPA1L1O43166 1804 aa37.26■■■■□ 3.56
CMTM4-202ENST00000394106 MAGEB6P1A0A0J9YX57 407 aa37.26■■■■□ 3.56
CMTM4-202ENST00000394106 SLC4A8Q2Y0W8 1093 aa37.26■■■■□ 3.56
CMTM4-202ENST00000394106 GPATCH3Q96I76 525 aa37.26■■■■□ 3.56
CMTM4-202ENST00000394106 HERC5Q9UII4 1024 aaKnown RBP37.26■■■■□ 3.56
CMTM4-202ENST00000394106 BTBD19C9JJ37 291 aa37.25■■■■□ 3.55
CMTM4-202ENST00000394106 FRMD4AQ9P2Q2 1039 aaPredicted RBP37.25■■■■□ 3.55
CMTM4-202ENST00000394106 RIOK1Q9BRS2 568 aaKnown RBP37.24■■■■□ 3.55
CMTM4-202ENST00000394106 TRIM34Q9BYJ4 488 aa37.24■■■■□ 3.55
CMTM4-202ENST00000394106 MYH1P12882 1939 aa37.24■■■■□ 3.55
CMTM4-202ENST00000394106 TCRBV5S4A2TA0A5A2 114 aa37.23■■■■□ 3.55
CMTM4-202ENST00000394106 CRACR2BQ8N4Y2 399 aaPredicted RBP37.23■■■■□ 3.55
CMTM4-202ENST00000394106 DDX24Q9GZR7 859 aaKnown RBP eCLIP37.23■■■■□ 3.55
CMTM4-202ENST00000394106 ZFYVE28Q9HCC9 887 aa37.23■■■■□ 3.55
CMTM4-202ENST00000394106 HLA-DOAP06340 250 aa37.22■■■■□ 3.55
CMTM4-202ENST00000394106 TSHZ3Q63HK5 1081 aa37.22■■■■□ 3.55
CMTM4-202ENST00000394106 CXCL11O14625 94 aa37.21■■■■□ 3.55
CMTM4-202ENST00000394106 CCDC84Q86UT8 332 aaPredicted RBP37.21■■■■□ 3.55
CMTM4-202ENST00000394106 ATAD5Q96QE3 1844 aa37.21■■■■□ 3.55
CMTM4-202ENST00000394106 RRP1BQ14684 758 aaKnown RBP37.2■■■■□ 3.55
CMTM4-202ENST00000394106 SLFNL1Q499Z3 407 aa37.2■■■■□ 3.55
CMTM4-202ENST00000394106 FOXP4Q8IVH2 680 aaPredicted RBP37.2■■■■□ 3.55
CMTM4-202ENST00000394106 AFG3L2Q9Y4W6 797 aa37.2■■■■□ 3.55
CMTM4-202ENST00000394106 PHIPQ8WWQ0 1821 aa37.2■■■■□ 3.54
CMTM4-202ENST00000394106 ADD2P35612 726 aa37.19■■■■□ 3.54
CMTM4-202ENST00000394106 CAP2P40123 477 aa37.19■■■■□ 3.54
CMTM4-202ENST00000394106 CRNKL1Q9BZJ0 848 aaKnown RBP37.19■■■■□ 3.54
CMTM4-202ENST00000394106 ZCCHC17Q9NP64 241 aaKnown RBP37.19■■■■□ 3.54
CMTM4-202ENST00000394106 MYH7P12883 1935 aa37.18■■■■□ 3.54
CMTM4-202ENST00000394106 ANKRD23Q86SG2 305 aa37.18■■■■□ 3.54
CMTM4-202ENST00000394106 DNAJC18Q9H819 358 aa37.18■■■■□ 3.54
CMTM4-202ENST00000394106 TRIM75PA6NK02 468 aa37.17■■■■□ 3.54
CMTM4-202ENST00000394106 CCDC85CA6NKD9 419 aa37.17■■■■□ 3.54
CMTM4-202ENST00000394106 MOGSQ13724 837 aa37.17■■■■□ 3.54
CMTM4-202ENST00000394106 LCORLQ8N3X6 602 aa37.17■■■■□ 3.54
CMTM4-202ENST00000394106 ZBTB47Q9UFB7 747 aaPredicted RBP37.16■■■■□ 3.54
CMTM4-202ENST00000394106 SUPT16HQ9Y5B9 1047 aaKnown RBP37.16■■■■□ 3.54
CMTM4-202ENST00000394106 NAV1Q8NEY1 1877 aa37.16■■■■□ 3.54
CMTM4-202ENST00000394106 A0A0G2JLL6 359 aaPredicted RBP37.15■■■■□ 3.54
CMTM4-202ENST00000394106 PDHXO00330 501 aa37.15■■■■□ 3.54
CMTM4-202ENST00000394106 CHGBP05060 677 aa37.15■■■■□ 3.54
CMTM4-202ENST00000394106 SP3Q02447 781 aa37.15■■■■□ 3.54
CMTM4-202ENST00000394106 HDAC1Q13547 482 aaPredicted RBP37.15■■■■□ 3.54
CMTM4-202ENST00000394106 AAMPQ13685 434 aa37.15■■■■□ 3.54
CMTM4-202ENST00000394106 PRRT2Q7Z6L0 340 aaPredicted RBP37.15■■■■□ 3.54
CMTM4-202ENST00000394106 METTL16Q86W50 562 aaKnown RBP37.15■■■■□ 3.54
CMTM4-202ENST00000394106 ERO1AQ96HE7 468 aa37.15■■■■□ 3.54
CMTM4-202ENST00000394106 ARMT1Q9H993 441 aa37.15■■■■□ 3.54
CMTM4-202ENST00000394106 GADL1Q6ZQY3 521 aa37.14■■■■□ 3.54
CMTM4-202ENST00000394106 EXOC6Q8TAG9 804 aa37.14■■■■□ 3.54
CMTM4-202ENST00000394106 CD99L2Q8TCZ2 262 aa37.14■■■■□ 3.54
CMTM4-202ENST00000394106 OTUD7AQ8TE49 926 aaPredicted RBP37.14■■■■□ 3.54
CMTM4-202ENST00000394106 PTPRFP10586 1907 aa37.13■■■■□ 3.53
CMTM4-202ENST00000394106 MBD4O95243 580 aa37.13■■■■□ 3.53
CMTM4-202ENST00000394106 PKN2Q16513 984 aaKnown RBP37.13■■■■□ 3.53
CMTM4-202ENST00000394106 ANKRD45Q5TZF3 282 aa37.13■■■■□ 3.53
CMTM4-202ENST00000394106 ZSCAN25Q6NSZ9 544 aa37.13■■■■□ 3.53
CMTM4-202ENST00000394106 FASTKD5Q7L8L6 764 aaKnown RBP37.13■■■■□ 3.53
CMTM4-202ENST00000394106 GPAT2Q6NUI2 795 aa37.12■■■■□ 3.53
CMTM4-202ENST00000394106 TTC6Q86TZ1 520 aa37.12■■■■□ 3.53
CMTM4-202ENST00000394106 SDR42E1Q8WUS8 393 aa37.12■■■■□ 3.53
CMTM4-202ENST00000394106 GCC1Q96CN9 775 aa37.12■■■■□ 3.53
CMTM4-202ENST00000394106 TTC41PQ6P2S7 1318 aa37.11■■■■□ 3.53
CMTM4-202ENST00000394106 DDX60LQ5H9U9 1706 aaKnown RBP37.11■■■■□ 3.53
CMTM4-202ENST00000394106 TLR2O60603 784 aa37.11■■■■□ 3.53
CMTM4-202ENST00000394106 GDF11O95390 407 aa37.11■■■■□ 3.53
CMTM4-202ENST00000394106 POLR3DP05423 398 aaPredicted RBP37.11■■■■□ 3.53
CMTM4-202ENST00000394106 UBE3CQ15386 1083 aa37.11■■■■□ 3.53
CMTM4-202ENST00000394106 TRIM17Q9Y577 477 aa37.11■■■■□ 3.53
CMTM4-202ENST00000394106 USP17L5A8MUK1 530 aa37.1■■■■□ 3.53
CMTM4-202ENST00000394106 SPP2Q13103 211 aa37.1■■■■□ 3.53
CMTM4-202ENST00000394106 MCM9Q9NXL9 1143 aa37.1■■■■□ 3.53
CMTM4-202ENST00000394106 SERPINB13Q9UIV8 391 aa37.1■■■■□ 3.53
CMTM4-202ENST00000394106 JAG1P78504 1218 aa37.09■■■■□ 3.53
CMTM4-202ENST00000394106 ZNF280CQ8ND82 737 aa37.09■■■■□ 3.53
CMTM4-202ENST00000394106 EHD4Q9H223 541 aa37.09■■■■□ 3.53
CMTM4-202ENST00000394106 ERC2O15083 957 aa37.08■■■■□ 3.53
CMTM4-202ENST00000394106 ASNSP08243 561 aa37.08■■■■□ 3.53
CMTM4-202ENST00000394106 SHROOM1Q2M3G4 852 aaPredicted RBP37.08■■■■□ 3.53
CMTM4-202ENST00000394106 KBTBD3Q8NAB2 608 aa37.08■■■■□ 3.53
CMTM4-202ENST00000394106 TBC1D2Q9BYX2 928 aa37.08■■■■□ 3.53
CMTM4-202ENST00000394106 PRKAB2O43741 272 aa37.07■■■■□ 3.52
CMTM4-202ENST00000394106 MX1P20591 662 aa37.07■■■■□ 3.52
CMTM4-202ENST00000394106 PLCD1P51178 756 aa37.07■■■■□ 3.52
CMTM4-202ENST00000394106 OTOP1Q7RTM1 612 aa37.07■■■■□ 3.52
CMTM4-202ENST00000394106 AS3MTQ9HBK9 375 aa37.07■■■■□ 3.52
CMTM4-202ENST00000394106 DCP1AQ9NPI6 582 aaPredicted RBP37.07■■■■□ 3.52
CMTM4-202ENST00000394106 FBXO46Q6PJ61 603 aaPredicted RBP37.06■■■■□ 3.52
CMTM4-202ENST00000394106 PI4K2BQ8TCG2 481 aa37.06■■■■□ 3.52
CMTM4-202ENST00000394106 PARK7Q99497 189 aaKnown RBP37.06■■■■□ 3.52
CMTM4-202ENST00000394106 CPA4Q9UI42 421 aa37.06■■■■□ 3.52
CMTM4-202ENST00000394106 HPS5Q9UPZ3 1129 aa37.06■■■■□ 3.52
CMTM4-202ENST00000394106 GLRX3O76003 335 aaKnown RBP37.05■■■■□ 3.52
CMTM4-202ENST00000394106 PUS7LQ9H0K6 701 aaKnown RBP37.05■■■■□ 3.52
CMTM4-202ENST00000394106 RWDD1Q9H446 243 aaPredicted RBP37.05■■■■□ 3.52
CMTM4-202ENST00000394106 EFCC1Q9HA90 598 aa37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms