RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NR2E3Q9Y5X4 410 aa19.05■□□□□ 0.64
CHMP3-202ENST00000393773 CT47B1P0C2W7 299 aaPredicted RBP19.04■□□□□ 0.64
CHMP3-202ENST00000393773 TFCP2Q12800 502 aa19.04■□□□□ 0.64
CHMP3-202ENST00000393773 MTX1Q13505 466 aa19.04■□□□□ 0.64
CHMP3-202ENST00000393773 MVPQ14764 893 aaKnown RBP19.04■□□□□ 0.64
CHMP3-202ENST00000393773 DEFB118Q96PH6 123 aa19.04■□□□□ 0.64
CHMP3-202ENST00000393773 CRISPLD2Q9H0B8 497 aa19.04■□□□□ 0.64
CHMP3-202ENST00000393773 PNMA3Q9UL41 463 aa19.04■□□□□ 0.64
CHMP3-202ENST00000393773 HDAC5Q9UQL6 1122 aa19.04■□□□□ 0.64
CHMP3-202ENST00000393773 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
CHMP3-202ENST00000393773 NSUN4Q96CB9 384 aaKnown RBP19.03■□□□□ 0.64
CHMP3-202ENST00000393773 OSBPL5Q9H0X9 879 aaPredicted RBP19.03■□□□□ 0.64
CHMP3-202ENST00000393773 HMG20BQ9P0W2 317 aa19.03■□□□□ 0.64
CHMP3-202ENST00000393773 A0A1W2PPC1 479 aa19.02■□□□□ 0.64
CHMP3-202ENST00000393773 SRGAP3O43295 1099 aa19.02■□□□□ 0.64
CHMP3-202ENST00000393773 CAPN2P17655 700 aa19.02■□□□□ 0.64
CHMP3-202ENST00000393773 ARID4AP29374 1257 aaPredicted RBP19.02■□□□□ 0.64
CHMP3-202ENST00000393773 DIS3LQ8TF46 1054 aaKnown RBP19.02■□□□□ 0.64
CHMP3-202ENST00000393773 COA7Q96BR5 231 aa19.02■□□□□ 0.64
CHMP3-202ENST00000393773 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.02■□□□□ 0.64
CHMP3-202ENST00000393773 AKAP2Q9Y2D5 859 aa19.02■□□□□ 0.64
CHMP3-202ENST00000393773 MYH1P12882 1939 aa19.02■□□□□ 0.63
CHMP3-202ENST00000393773 MAP4K4O95819 1239 aaPredicted RBP19.01■□□□□ 0.63
CHMP3-202ENST00000393773 RRP1BQ14684 758 aaKnown RBP19.01■□□□□ 0.63
CHMP3-202ENST00000393773 ZNF280CQ8ND82 737 aa19.01■□□□□ 0.63
CHMP3-202ENST00000393773 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHMP3-202ENST00000393773 TAOK2Q9UL54 1235 aa19.01■□□□□ 0.63
CHMP3-202ENST00000393773 DNAH12Q6ZR08 3092 aa19■□□□□ 0.63
CHMP3-202ENST00000393773 SOX1O00570 391 aaPredicted RBP19■□□□□ 0.63
CHMP3-202ENST00000393773 EVI5O60447 810 aa19■□□□□ 0.63
CHMP3-202ENST00000393773 TFRCP02786 760 aaKnown RBP19■□□□□ 0.63
CHMP3-202ENST00000393773 HMGCS2P54868 508 aa19■□□□□ 0.63
CHMP3-202ENST00000393773 SPP2Q13103 211 aa19■□□□□ 0.63
CHMP3-202ENST00000393773 SPATA5Q8NB90 893 aa19■□□□□ 0.63
CHMP3-202ENST00000393773 TBC1D2Q9BYX2 928 aa19■□□□□ 0.63
CHMP3-202ENST00000393773 A0A0C4DFX4 3053 aa18.99■□□□□ 0.63
CHMP3-202ENST00000393773 HMGCRP04035 888 aa18.99■□□□□ 0.63
CHMP3-202ENST00000393773 CAP2P40123 477 aa18.99■□□□□ 0.63
CHMP3-202ENST00000393773 GCLCP48506 637 aaPredicted RBP18.99■□□□□ 0.63
CHMP3-202ENST00000393773 GSTO1P78417 241 aa18.99■□□□□ 0.63
CHMP3-202ENST00000393773 TBC1D9Q6ZT07 1266 aa18.99■□□□□ 0.63
CHMP3-202ENST00000393773 PAWRQ96IZ0 340 aaKnown RBP18.99■□□□□ 0.63
CHMP3-202ENST00000393773 GNAI3P08754 354 aa18.98■□□□□ 0.63
CHMP3-202ENST00000393773 MCAMP43121 646 aa18.98■□□□□ 0.63
CHMP3-202ENST00000393773 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
CHMP3-202ENST00000393773 SH3D19Q5HYK7 790 aa18.98■□□□□ 0.63
CHMP3-202ENST00000393773 ASCC2Q9H1I8 757 aaPredicted RBP18.98■□□□□ 0.63
CHMP3-202ENST00000393773 MNX1P50219 401 aaPredicted RBP18.97■□□□□ 0.63
CHMP3-202ENST00000393773 TRIM32Q13049 653 aa18.97■□□□□ 0.63
CHMP3-202ENST00000393773 PABPC4Q13310 644 aaKnown RBP eCLIP18.97■□□□□ 0.63
CHMP3-202ENST00000393773 ANKLE1Q8NAG6 615 aa18.97■□□□□ 0.63
CHMP3-202ENST00000393773 NEUROD6Q96NK8 337 aa18.97■□□□□ 0.63
CHMP3-202ENST00000393773 HERC5Q9UII4 1024 aaKnown RBP18.97■□□□□ 0.63
CHMP3-202ENST00000393773 GJD2Q9UKL4 321 aa18.97■□□□□ 0.63
CHMP3-202ENST00000393773 LAMA2P24043 3122 aaKnown RBP18.96■□□□□ 0.63
CHMP3-202ENST00000393773 USP17L5A8MUK1 530 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 LDHCP07864 332 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 NECAB2Q7Z6G3 386 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 TEX11Q8IYF3 940 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
CHMP3-202ENST00000393773 ARHGAP45Q92619 1136 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 RAI14Q9P0K7 980 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 MORF4L1Q9UBU8 362 aa18.96■□□□□ 0.63
CHMP3-202ENST00000393773 MTMR2Q13614 643 aa18.95■□□□□ 0.62
CHMP3-202ENST00000393773 TRIB2Q92519 343 aa18.95■□□□□ 0.62
CHMP3-202ENST00000393773 LRCH3Q96II8 777 aa18.95■□□□□ 0.62
CHMP3-202ENST00000393773 STAP2Q9UGK3 403 aa18.95■□□□□ 0.62
CHMP3-202ENST00000393773 RPTORQ8N122 1335 aa18.95■□□□□ 0.62
CHMP3-202ENST00000393773 NAV1Q8NEY1 1877 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 CUL9Q8IWT3 2517 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 PNMA6EA0A0J9YXQ4 647 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 JAG1P78504 1218 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 C7orf61Q8IZ16 206 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 GDF15Q99988 308 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 WDR18Q9BV38 432 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 AS3MTQ9HBK9 375 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 FLT1P17948 1338 aa18.94■□□□□ 0.62
CHMP3-202ENST00000393773 SHROOM1Q2M3G4 852 aaPredicted RBP18.93■□□□□ 0.62
CHMP3-202ENST00000393773 GORABQ5T7V8 394 aa18.93■□□□□ 0.62
CHMP3-202ENST00000393773 MAP3K21Q5TCX8 1036 aa18.93■□□□□ 0.62
CHMP3-202ENST00000393773 ADGRA1Q86SQ6 560 aa18.93■□□□□ 0.62
CHMP3-202ENST00000393773 HMX1Q9NP08 348 aaPredicted RBP18.93■□□□□ 0.62
CHMP3-202ENST00000393773 TNNQ9UQP3 1299 aa18.93■□□□□ 0.62
CHMP3-202ENST00000393773 PEX10O60683 326 aa18.92■□□□□ 0.62
CHMP3-202ENST00000393773 TRIM27P14373 513 aa18.92■□□□□ 0.62
CHMP3-202ENST00000393773 BACE1P56817 501 aa18.92■□□□□ 0.62
CHMP3-202ENST00000393773 METTL16Q86W50 562 aaKnown RBP18.92■□□□□ 0.62
CHMP3-202ENST00000393773 DHX36Q9H2U1 1008 aaKnown RBP18.92■□□□□ 0.62
CHMP3-202ENST00000393773 TXNRD2Q9NNW7 524 aa18.92■□□□□ 0.62
CHMP3-202ENST00000393773 AATFQ9NY61 560 aaKnown RBP eCLIP18.92■□□□□ 0.62
CHMP3-202ENST00000393773 PI4KBQ9UBF8 816 aa18.92■□□□□ 0.62
CHMP3-202ENST00000393773 OGDHLQ9ULD0 1010 aa18.92■□□□□ 0.62
CHMP3-202ENST00000393773 UNC80Q8N2C7 3258 aa18.92■□□□□ 0.62
CHMP3-202ENST00000393773 LTBP2Q14767 1821 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 ASNSP08243 561 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 HOXA7P31268 230 aaPredicted RBP18.91■□□□□ 0.62
CHMP3-202ENST00000393773 BMP8BP34820 402 aa18.91■□□□□ 0.62
CHMP3-202ENST00000393773 HERVK_113P62684 666 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms