RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 OPHN1O60890 802 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 FAM71BQ8TC56 605 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 CALUO43852 315 aaPredicted RBP16.34■□□□□ 0.21
CCDC50-201ENST00000392455 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 FNBP1Q96RU3 617 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 CNNM4Q6P4Q7 775 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 ZNF804AQ7Z570 1209 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 PDZD8Q8NEN9 1154 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 CNPY2Q9Y2B0 182 aa16.34■□□□□ 0.21
CCDC50-201ENST00000392455 ARID5AQ03989 594 aa16.33■□□□□ 0.21
CCDC50-201ENST00000392455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.33■□□□□ 0.21
CCDC50-201ENST00000392455 MAN1A2O60476 641 aa16.33■□□□□ 0.21
CCDC50-201ENST00000392455 RILPQ96NA2 401 aa16.33■□□□□ 0.21
CCDC50-201ENST00000392455 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.21
CCDC50-201ENST00000392455 PFDN1O60925 122 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 FCHSD1Q86WN1 690 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 TLDC2A0PJX2 215 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 CLCN1P35523 988 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.2
CCDC50-201ENST00000392455 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 PDZD4Q76G19 769 aaPredicted RBP16.33■□□□□ 0.2
CCDC50-201ENST00000392455 BRF1Q92994 677 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 TEX12Q9BXU0 123 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 HOMER3Q9NSC5 361 aa16.33■□□□□ 0.2
CCDC50-201ENST00000392455 TAF11Q15544 211 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 LRCH2Q5VUJ6 765 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
CCDC50-201ENST00000392455 RUNDC3BQ96NL0 473 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 ACEP12821 1306 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 GON4LQ3T8J9 2241 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 MAGEB6P1A0A0J9YX57 407 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
CCDC50-201ENST00000392455 RLBP1P12271 317 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
CCDC50-201ENST00000392455 MCMDC2Q4G0Z9 681 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 CABS1Q96KC9 395 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 EIF3CLB5ME19 914 aaKnown RBP16.32■□□□□ 0.2
CCDC50-201ENST00000392455 BCRP11274 1271 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 RNF34Q969K3 372 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 EIF3CQ99613 913 aaKnown RBP16.32■□□□□ 0.2
CCDC50-201ENST00000392455 ZNF449Q6P9G9 518 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 DMRT2Q9Y5R5 561 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 ITSN2Q9NZM3 1697 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 GFAPP14136 432 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 KLHL14Q9P2G3 628 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 ARHGAP42A6NI28 874 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 HNRNPCL2B2RXH8 293 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 HNRNPCL1O60812 293 aaKnown RBP16.32■□□□□ 0.2
CCDC50-201ENST00000392455 ATP2B3Q16720 1220 aa16.32■□□□□ 0.2
CCDC50-201ENST00000392455 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 GRK7Q8WTQ7 553 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 LRRD1A4D1F6 860 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 LPXNO60711 386 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 KRBA2Q6ZNG9 492 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 IQUBQ8NA54 791 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 RHPN1Q8TCX5 695 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 NACA2Q9H009 215 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 SCHIP1Q9P0W5 487 aaPredicted RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 TRIM56Q9BRZ2 755 aaKnown RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 VEZTQ9HBM0 779 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 AKR1B15C9JRZ8 316 aaPredicted RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 XAGE3Q8WTP9 111 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 SPATS2LQ9NUQ6 558 aaKnown RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 DTHD1Q6ZMT9 781 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 TMX3Q96JJ7 454 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 NAPGQ99747 312 aaPredicted RBP16.31■□□□□ 0.2
CCDC50-201ENST00000392455 APOEP02649 317 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 LMNB1P20700 586 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 EVCP57679 992 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 NUCB1Q02818 461 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 CARD10Q9BWT7 1032 aa16.31■□□□□ 0.2
CCDC50-201ENST00000392455 KRT2P35908 639 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 GUCA1BQ9UMX6 200 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 ARHGEF9O43307 516 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 FLOT1O75955 427 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 HAUS3Q68CZ6 603 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 PPP1R21Q6ZMI0 780 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 PLCD1P51178 756 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 SDSP20132 328 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 LRGUKQ96M69 825 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC50-201ENST00000392455 MCM7P33993 719 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 PNMA2Q9UL42 364 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 IMPACTQ9P2X3 320 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 RBM8AQ9Y5S9 174 aaKnown RBP16.3■□□□□ 0.2
CCDC50-201ENST00000392455 MSH6P52701 1360 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 GCKP35557 465 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 AKNAD1Q5T1N1 836 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 MYCBPQ99417 103 aaPredicted RBP16.3■□□□□ 0.2
CCDC50-201ENST00000392455 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms