RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TRIM28Q13263 835 aaKnown RBP4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 COL9A3Q14050 684 aaPredicted RBP4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 TAF7LQ5H9L4 462 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 NUTM2GQ5VZR2 741 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 SLC6A19Q695T7 634 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 CDC37L1Q7L3B6 337 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 TTC6Q86TZ1 520 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 C12orf40Q86WS4 652 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 HID1Q8IV36 788 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 MCATQ8IVS2 390 aaKnown RBP4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 FAM169BQ8N8A8 192 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 ST13P5Q8NFI4 369 aaPredicted RBP4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 NEDD1Q8NHV4 660 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 ATG4CQ96DT6 458 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 WDR89Q96FK6 387 aaPredicted RBP4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 TNKS2Q9H2K2 1166 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 ATXN3LQ9H3M9 355 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 PHAXQ9H814 394 aaKnown RBP4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 CNNM2Q9H8M5 875 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 SUGCTQ9HAC7 445 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 PICK1Q9NRD5 415 aa4.3□□□□□ -1.72
TRAJ40-201ENST00000390497 SBNO2Q9Y2G9 1366 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 DCDC2CA8MYV0 355 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 SHISA8B8ZZ34 492 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 DLL1O00548 723 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 TNFRSF10CO14798 259 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 DEAF1O75398 565 aaPredicted RBP4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 GRK4P32298 578 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 DGKGP49619 791 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 ETF1P62495 437 aaKnown RBP4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 RASA3Q14644 834 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 BBS9Q3SYG4 887 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 LARP1BQ659C4 914 aaKnown RBP4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 LYPD4Q6UWN0 246 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 EEPD1Q7L9B9 569 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 NLRC3Q7RTR2 1065 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 FMR1NBQ8N0W7 255 aaPredicted RBP4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 TMEM130Q8N3G9 435 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 CELF2-AS1Q8N7Q2 184 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 SMG8Q8ND04 991 aaKnown RBP4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 RNF214Q8ND24 703 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 WDR18Q9BV38 432 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 RUSC1Q9BVN2 902 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 TMPRSS13Q9BYE2 586 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 MRPL18Q9H0U6 180 aaKnown RBP4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 RNF208Q9H0X6 261 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 EPN3Q9H201 632 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 RRAGCQ9HB90 399 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 ST7Q9NRC1 585 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 HIF3AQ9Y2N7 669 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 CORINQ9Y5Q5 1042 aa4.29□□□□□ -1.72
TRAJ40-201ENST00000390497 A0A0A0MRY4 1105 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 PRAMEF27A3QJZ7 478 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 FAM221BA6H8Z2 402 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 DDX3YO15523 660 aaKnown RBP4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 CDK8P49336 464 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 LONRF2Q1L5Z9 754 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 ARSHQ5FYA8 562 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 ZC3H12BQ5HYM0 836 aaKnown RBP4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 ZBTB37Q5TC79 503 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 UNC5AQ6ZN44 842 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 HOMER1Q86YM7 354 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 MRPL41Q8IXM3 137 aaKnown RBP4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 FAM178BQ8IXR5 827 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 SLFN12Q8IYM2 578 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 ANKRD13AQ8IZ07 590 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 SYNPOQ8N3V7 929 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 APPBP2Q92624 585 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 RNPC3Q96LT9 517 aaKnown RBP4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 CCDC74BQ96LY2 380 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 DNAJC7Q99615 494 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 SLKQ9H2G2 1235 aaPredicted RBP4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 CRIM1Q9NZV1 1036 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 MAPK8IP1Q9UQF2 711 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 PCDHGC5Q9Y5F6 944 aa4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 MRPL42Q9Y6G3 142 aaKnown RBP4.28□□□□□ -1.72
TRAJ40-201ENST00000390497 CCDC163A0A0D9SF12 145 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 IQCA1LA6NCM1 817 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 CCDC85CA6NKD9 419 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 GNB5O14775 395 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 PPP1R12AO14974 1030 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 PPM1GO15355 546 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 ADAM11O75078 769 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 GJB6O95452 261 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 DLGAP3O95886 979 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 CTSBP07858 339 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 NAT2P11245 290 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 ELNP15502 786 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 RAG1P15918 1043 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 SELPP16109 830 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 CAP2P40123 477 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 ZNF143P52747 638 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 SOX4Q06945 474 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 FOXD4L6Q3SYB3 417 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 MTERF2Q49AM1 385 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 PLEKHG4Q58EX7 1191 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 PRRT3Q5FWE3 981 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 RNF187Q5TA31 235 aaPredicted RBP4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 ANKRD34AQ69YU3 496 aa4.27□□□□□ -1.73
TRAJ40-201ENST00000390497 FOXD4L3Q6VB84 417 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms