RNA–Protein interactions for RNA: ENST00000384741.1

RNU6-41P-201, Transcript of RNA, U6 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU6-41P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-41P-201ENST00000384741 MBD1Q9UIS9 605 aaPredicted RBP2.91□□□□□ -1.94
RNU6-41P-201ENST00000384741 RNGTTO60942 597 aaKnown RBP2.9□□□□□ -1.95
RNU6-41P-201ENST00000384741 ZNF20P17024 532 aa2.9□□□□□ -1.95
RNU6-41P-201ENST00000384741 EPHB3P54753 998 aa2.9□□□□□ -1.95
RNU6-41P-201ENST00000384741 C16orf46Q6P387 395 aa2.9□□□□□ -1.95
RNU6-41P-201ENST00000384741 LINC01356Q8N9X3 169 aa2.9□□□□□ -1.95
RNU6-41P-201ENST00000384741 ISL2Q96A47 359 aa2.9□□□□□ -1.95
RNU6-41P-201ENST00000384741 FOXQ1Q9C009 403 aa2.9□□□□□ -1.95
RNU6-41P-201ENST00000384741 PRR33A8MZF0 331 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 H3BS24 57 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 IRS4O14654 1257 aaPredicted RBP2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 EOMESO95936 686 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 LIG1P18858 919 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 TIGD5Q53EQ6 642 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 PEAR1Q5VY43 1037 aaPredicted RBP2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 IL27Q8NEV9 243 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 NUDT16Q96DE0 195 aaKnown RBP2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 PRDM10Q9NQV6 1147 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 MAPK8IP1Q9UQF2 711 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 YBX2Q9Y2T7 364 aaKnown RBP2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 ST14Q9Y5Y6 855 aa2.89□□□□□ -1.95
RNU6-41P-201ENST00000384741 ZBTB39O15060 712 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 ZNF862O60290 1169 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 B3GALT4O96024 378 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 UBXN11Q5T124 520 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 CDKAL1Q5VV42 579 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 LARP1Q6PKG0 1096 aaKnown RBP2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 ANKMY2Q8IV38 441 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 TMEFF1Q8IYR6 380 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 CCDC86Q9H6F5 360 aaKnown RBP2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 C19orf44Q9H6X5 657 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 CWC22Q9HCG8 908 aaKnown RBP2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 LATS2Q9NRM7 1088 aa2.88□□□□□ -1.95
RNU6-41P-201ENST00000384741 EREGO14944 169 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 EDN3P14138 238 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 KLF10Q13118 480 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 KIF4BQ2VIQ3 1234 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 C22orf34Q6ZV56 151 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 THAP5Q7Z6K1 395 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 LILRA2Q8N149 483 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 PMEPA1Q969W9 287 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 ARXQ96QS3 562 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 ADAMTS10Q9H324 1103 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 PRDM5Q9NQX1 630 aaPredicted RBP2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 C11orf21Q9P2W6 132 aa2.87□□□□□ -1.95
RNU6-41P-201ENST00000384741 PCSK5Q92824 1860 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 A0A096LPE4 126 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 A0A1W2PPZ6 126 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 KRTAP29-1A8MX34 341 aaPredicted RBP2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 FAM155AB1AL88 458 aaPredicted RBP2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L15C9J2P7 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L10C9JJH3 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L13C9JLJ4 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L12C9JPN9 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L11C9JVI0 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L21D6R901 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L18D6R9N7 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L22D6RA61 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L17D6RBQ6 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L19D6RCP7 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L20D6RJB6 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 N4BP3O15049 544 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 FZD7O75084 574 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 ESR1P03372 595 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 ITGB3P05106 788 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 SLFN14P0C7P3 912 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP17L24Q0WX57 530 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 SMN1Q16637 294 aaKnown RBP2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 CNKSR3Q6P9H4 555 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 SPRED1Q7Z699 444 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 FERMT3Q86UX7 667 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 FAM129CQ86XR2 697 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 MFSD4AQ8N468 514 aa2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 RBM15Q96T37 977 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 ING1Q9UK53 422 aaPredicted RBP2.86□□□□□ -1.95
RNU6-41P-201ENST00000384741 PDE6BP35913 854 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 GRIA4P48058 902 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 KCNC1P48547 511 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 SLURP1P55000 103 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 AP3B2Q13367 1082 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 SPRED3Q2MJR0 410 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 TTC9BQ8N6N2 239 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 PDZD8Q8NEN9 1154 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 C8orf49Q96NF6 230 aa2.85□□□□□ -1.95
RNU6-41P-201ENST00000384741 A6NHS1 94 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 FAM196BA6NMK8 535 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 POM121CA8CG34 1229 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 HRKO00198 91 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 SRSF3P84103 164 aaKnown RBP2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 USP51Q70EK9 711 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 UBE3DQ7Z6J8 389 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 DDX54Q8TDD1 881 aaKnown RBP2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 UBE2FQ969M7 185 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 GGNBP2Q9H3C7 697 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 CNTD2Q9H8S5 307 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 SSU72Q9NP77 194 aaKnown RBP2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 COG6Q9Y2V7 657 aa2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 MAFBQ9Y5Q3 323 aaPredicted RBP2.84□□□□□ -1.95
RNU6-41P-201ENST00000384741 CAPN6Q9Y6Q1 641 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms