RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 AKR1B10O60218 316 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 MCAMP43121 646 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 JAKMIP3Q5VZ66 844 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 TAF4BQ92750 862 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 LRRC27Q9C0I9 530 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 GPCPD1Q9NPB8 672 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 TOB2Q14106 344 aaPredicted RBP20.16■□□□□ 0.82
UBL3-201ENST00000380680 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 NFE2L3Q9Y4A8 694 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 PIH1D3Q9NQM4 214 aaKnown RBP20.15■□□□□ 0.82
UBL3-201ENST00000380680 CARMIL3Q8ND23 1372 aa20.15■□□□□ 0.82
UBL3-201ENST00000380680 USP32Q8NFA0 1604 aa20.15■□□□□ 0.82
UBL3-201ENST00000380680 NDUFA8P51970 172 aa20.15■□□□□ 0.82
UBL3-201ENST00000380680 SYT10Q6XYQ8 523 aa20.15■□□□□ 0.82
UBL3-201ENST00000380680 ZSCAN10Q96SZ4 725 aaPredicted RBP20.15■□□□□ 0.82
UBL3-201ENST00000380680 EYA3Q99504 573 aa20.15■□□□□ 0.82
UBL3-201ENST00000380680 RASGRF1Q13972 1273 aa20.14■□□□□ 0.82
UBL3-201ENST00000380680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.14■□□□□ 0.82
UBL3-201ENST00000380680 PNOCQ13519 176 aa20.14■□□□□ 0.81
UBL3-201ENST00000380680 MED23Q9ULK4 1368 aa20.14■□□□□ 0.81
UBL3-201ENST00000380680 CDR1P51861 262 aa20.14■□□□□ 0.81
UBL3-201ENST00000380680 POSTNQ15063 836 aa20.14■□□□□ 0.81
UBL3-201ENST00000380680 CLIC6Q96NY7 704 aa20.14■□□□□ 0.81
UBL3-201ENST00000380680 IL25Q9H293 177 aa20.14■□□□□ 0.81
UBL3-201ENST00000380680 CEP170BQ9Y4F5 1589 aaPredicted RBP20.14■□□□□ 0.81
UBL3-201ENST00000380680 CCT6AP40227 531 aaKnown RBP20.13■□□□□ 0.81
UBL3-201ENST00000380680 ERFEQ4G0M1 354 aa20.13■□□□□ 0.81
UBL3-201ENST00000380680 MLKLQ8NB16 471 aa20.13■□□□□ 0.81
UBL3-201ENST00000380680 CCDC175P0C221 793 aa20.13■□□□□ 0.81
UBL3-201ENST00000380680 CMA1P23946 247 aa20.13■□□□□ 0.81
UBL3-201ENST00000380680 FOXO4P98177 505 aa20.13■□□□□ 0.81
UBL3-201ENST00000380680 ISCA1Q9BUE6 129 aa20.13■□□□□ 0.81
UBL3-201ENST00000380680 KARSQ15046 597 aaKnown RBP20.13■□□□□ 0.81
UBL3-201ENST00000380680 MFSD14BQ5SR56 506 aa20.13■□□□□ 0.81
UBL3-201ENST00000380680 UBXN1Q04323 297 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 RABL6Q3YEC7 729 aaPredicted RBP20.12■□□□□ 0.81
UBL3-201ENST00000380680 RTEL1Q9NZ71 1219 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
UBL3-201ENST00000380680 SERTAD1Q9UHV2 236 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 SAMM50Q9Y512 469 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 SLU7O95391 586 aaKnown RBP20.12■□□□□ 0.81
UBL3-201ENST00000380680 WWC2Q6AWC2 1192 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 LCORLQ8N3X6 602 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 ERMNQ8TAM6 284 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 GBP3Q9H0R5 595 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 LZTFL1Q9NQ48 299 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 ZSWIM5Q9P217 1185 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 RCOR1Q9UKL0 485 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 VPS36Q86VN1 386 aa20.12■□□□□ 0.81
UBL3-201ENST00000380680 A0A087WWV3 80 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 CHGBP05060 677 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 ARID4AP29374 1257 aaPredicted RBP20.11■□□□□ 0.81
UBL3-201ENST00000380680 LRMPQ12912 555 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 TRMT44Q8IYL2 757 aaKnown RBP20.11■□□□□ 0.81
UBL3-201ENST00000380680 XPO4Q9C0E2 1151 aaKnown RBP20.11■□□□□ 0.81
UBL3-201ENST00000380680 MMRN2Q9H8L6 949 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 ZNF804BA4D1E1 1349 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 DYNLL1P63167 89 aaKnown RBP20.11■□□□□ 0.81
UBL3-201ENST00000380680 SMARCC2Q8TAQ2 1214 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 VPS16Q9H269 839 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 EHMT1Q9H9B1 1298 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 MYO6Q9UM54 1294 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 MRVI1Q9Y6F6 885 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 PAFAH1B1P43034 410 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 GTF2IP78347 998 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 AIFM3Q96NN9 605 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 BAG1Q99933 345 aaPredicted RBP20.11■□□□□ 0.81
UBL3-201ENST00000380680 RESTQ13127 1097 aa20.11■□□□□ 0.81
UBL3-201ENST00000380680 CCDC66A2RUB6 948 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 SPDYE3A6NKU9 549 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 MYO1BO43795 1136 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
UBL3-201ENST00000380680 DPP8Q6V1X1 898 aaPredicted RBP20.1■□□□□ 0.81
UBL3-201ENST00000380680 CYP2E1P05181 493 aaPredicted RBP20.1■□□□□ 0.81
UBL3-201ENST00000380680 PDIA6Q15084 440 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 LEKR1Q6ZMV7 388 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 CENPHQ9H3R5 247 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
UBL3-201ENST00000380680 CYP19A1P11511 503 aaPredicted RBP20.1■□□□□ 0.81
UBL3-201ENST00000380680 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.1■□□□□ 0.81
UBL3-201ENST00000380680 FERMT2Q96AC1 680 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 CRACR2AQ9BSW2 395 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 JADE2Q9NQC1 790 aa20.1■□□□□ 0.81
UBL3-201ENST00000380680 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
UBL3-201ENST00000380680 PNMA1Q8ND90 353 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 GJB4Q9NTQ9 266 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 CYLC1P35663 651 aaPredicted RBP20.09■□□□□ 0.81
UBL3-201ENST00000380680 TXKP42681 527 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 ATG9AQ7Z3C6 839 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 HDAC9Q9UKV0 1011 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 PLCD1P51178 756 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 STRBPQ96SI9 672 aaKnown RBP20.09■□□□□ 0.81
UBL3-201ENST00000380680 CTNND2Q9UQB3 1225 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 POLR3GO15318 223 aaPredicted RBP20.09■□□□□ 0.81
UBL3-201ENST00000380680 CCNT1O60563 726 aaKnown RBP20.09■□□□□ 0.81
UBL3-201ENST00000380680 SLC39A14Q15043 492 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 CLEC17AQ6ZS10 378 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 IGSF22Q8N9C0 903 aa20.09■□□□□ 0.81
UBL3-201ENST00000380680 TRIM28Q13263 835 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms