RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 ZSCAN22P10073 491 aaPredicted RBP13.84□□□□□ -0.19
CHD3-203ENST00000380358 TRAF1Q13077 416 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 ASIC2Q16515 512 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 NBPF3Q9H094 633 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 UTP11Q9Y3A2 253 aaKnown RBP13.84□□□□□ -0.19
CHD3-203ENST00000380358 VPS37BQ9H9H4 285 aa13.84□□□□□ -0.19
CHD3-203ENST00000380358 XAB2Q9HCS7 855 aaKnown RBP13.84□□□□□ -0.19
CHD3-203ENST00000380358 NEMFO60524 1076 aa13.83□□□□□ -0.19
CHD3-203ENST00000380358 HHATQ5VTY9 493 aa13.83□□□□□ -0.19
CHD3-203ENST00000380358 PRDM5Q9NQX1 630 aaPredicted RBP13.83□□□□□ -0.2
CHD3-203ENST00000380358 SPECC1L-ADORA2AF8WAN1 911 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 KRT15P19012 456 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 SLFN5Q08AF3 891 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
CHD3-203ENST00000380358 KAZNQ674X7 775 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 NACADO15069 1562 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 A0A1B0GVL5 298 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 TFCP2Q12800 502 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 ZBTB33Q86T24 672 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 KCNG4Q8TDN1 519 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 SPDL1Q96EA4 605 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 ARMT1Q9H993 441 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 UBN1Q9NPG3 1134 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 SPTLC2O15270 562 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 XPAP23025 273 aaPredicted RBP13.83□□□□□ -0.2
CHD3-203ENST00000380358 DNM2P50570 870 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 NME8Q8N427 588 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 TMX3Q96JJ7 454 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 MTRQ99707 1265 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 TRIM56Q9BRZ2 755 aaKnown RBP13.83□□□□□ -0.2
CHD3-203ENST00000380358 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 EYA3Q99504 573 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 HINFPQ9BQA5 517 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 POLIQ9UNA4 740 aa13.83□□□□□ -0.2
CHD3-203ENST00000380358 MGEA5O60502 916 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 TAF5LO75529 589 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 RARSP54136 660 aaKnown RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 RAB3IPQ96QF0 476 aaPredicted RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 CDCA7Q9BWT1 371 aaPredicted RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 BUB1BO60566 1050 aaPredicted RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 BAG2O95816 211 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 BLVRAP53004 296 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 TTC22Q5TAA0 569 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 EFCC1Q9HA90 598 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 INPP5FQ9Y2H2 1132 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 B4E1Z4 1266 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 MAFGO15525 162 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 MBD4O95243 580 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 VAV2P52735 878 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 TPH2Q8IWU9 490 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 TMTC2Q8N394 836 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 ZSCAN16Q9H4T2 348 aaPredicted RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 MRPL44Q9H9J2 332 aaKnown RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 CCDC62Q6P9F0 684 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 ZNF654Q8IZM8 581 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 ZNF513Q8N8E2 541 aaPredicted RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 HDAC11Q96DB2 347 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 SPC25Q9HBM1 224 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 RBM28Q9NW13 759 aaKnown RBP13.82□□□□□ -0.2
CHD3-203ENST00000380358 IVLP07476 585 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 ZNF853P0CG23 659 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 TRIM27P14373 513 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 GNA11P29992 359 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 RHPN1Q8TCX5 695 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
CHD3-203ENST00000380358 ARHGAP42A6NI28 874 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 EBAG9O00559 213 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 STAMQ92783 540 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 MEIS3Q99687 375 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 KRT33BQ14525 404 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHD3-203ENST00000380358 RILPL1Q5EBL4 403 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 ZBTB41Q5SVQ8 909 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 SZRD1Q7Z422 152 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 CCDC26Q8TAB7 109 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 ZBED4O75132 1171 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 NCAPG2Q86XI2 1143 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 GDAP1L1Q96MZ0 367 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 MLXIPQ9HAP2 919 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 TNNC1P63316 161 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 MAP7Q14244 749 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 NCAPGQ9BPX3 1015 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
CHD3-203ENST00000380358 FANCD2Q9BXW9 1451 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 CPA1P15085 419 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 PDE6AP16499 860 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 CNBD1Q8NA66 436 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 IFNB1P01574 187 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 RPL13P26373 211 aaKnown RBP13.81□□□□□ -0.2
CHD3-203ENST00000380358 SESN3P58005 492 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 SRGAP1Q7Z6B7 1085 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 PRKAG2Q9UGJ0 569 aa13.81□□□□□ -0.2
CHD3-203ENST00000380358 KRT222Q8N1A0 295 aa13.8□□□□□ -0.2
CHD3-203ENST00000380358 UHMK1Q8TAS1 419 aaKnown RBP13.8□□□□□ -0.2
CHD3-203ENST00000380358 MYL10Q9BUA6 226 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms