RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CPA4Q9UI42 421 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 MRVI1Q9Y6F6 885 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 INO80Q9ULG1 1556 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 MROH2AA6NES4 1674 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 FIBPO43427 364 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 CYP19A1P11511 503 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 GNAQP50148 359 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 RGMBQ6NW40 437 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 APBB1IPQ7Z5R6 666 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-202ENST00000379446 FERMT2Q96AC1 680 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ALG1Q9BT22 464 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 CCDC39Q9UFE4 941 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 ATP6V1DQ9Y5K8 247 aa7.49□□□□□ -1.21
NEDD9-202ENST00000379446 GLTPD2A6NH11 291 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 DCDC2CA8MYV0 355 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 ZBTB22O15209 634 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 CHMP2AO43633 222 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 TPM3P06753 285 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 CRKP46108 304 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 DIXDC1Q155Q3 683 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 WASF1Q92558 559 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 RRP36Q96EU6 259 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 NUDT12Q9BQG2 462 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 DEFB129Q9H1M3 183 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 TPM1P09493 284 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 PARP1P09874 1014 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 HSPA1AP0DMV8 641 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 HSPA1BP0DMV9 641 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 ZNF827Q17R98 1081 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 SASS6Q6UVJ0 657 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 SEPT14Q6ZU15 432 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 PDCL2Q8N4E4 241 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 CELF1Q92879 486 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 TMX3Q96JJ7 454 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 CCPG1Q9ULG6 757 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 PHACTR2O75167 634 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 IPO7O95373 1038 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 IDEP14735 1019 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 STK38Q15208 465 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 JAKMIP1Q96N16 626 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 ADCY9O60503 1353 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 MANSC4A6NHS7 340 aaPredicted RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 ABL1P00519 1130 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 AKNAD1Q5T1N1 836 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 NLRX1Q86UT6 975 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 SPATA5Q8NB90 893 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 SUGCTQ9HAC7 445 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 SEPT11Q9NVA2 429 aaKnown RBP7.48□□□□□ -1.21
NEDD9-202ENST00000379446 PAG1Q9NWQ8 432 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 HEG1Q9ULI3 1381 aa7.48□□□□□ -1.21
NEDD9-202ENST00000379446 HSPA6P17066 643 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 GNAT2P19087 354 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 GTF2A2P52657 109 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 HMGCS2P54868 508 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 ZBTB9Q96C00 473 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 GLT1D1Q96MS3 346 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 KIF2CQ99661 725 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 MYOZ2Q9NPC6 264 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 ADGRB1O14514 1584 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 MED14O60244 1454 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 TMEM232C9JQI7 657 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 TBC1D8O95759 1140 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 ACTN1P12814 892 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 RPS12P25398 132 aaKnown RBP7.47□□□□□ -1.21
NEDD9-202ENST00000379446 NAP1L1P55209 391 aaKnown RBP7.47□□□□□ -1.21
NEDD9-202ENST00000379446 KRT32Q14532 448 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 PUF60Q9UHX1 559 aaKnown RBP7.47□□□□□ -1.21
NEDD9-202ENST00000379446 ARHGEF40Q8TER5 1519 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 BECN2A8MW95 431 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 RGL2O15211 777 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 MLLT1Q03111 559 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-202ENST00000379446 SDF4Q9BRK5 362 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 ZKSCAN3Q9BRR0 538 aa7.47□□□□□ -1.21
NEDD9-202ENST00000379446 TTC12Q9H892 705 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-202ENST00000379446 FAM196BA6NMK8 535 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 USP17L5A8MUK1 530 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 CHL1O00533 1208 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 PRC1O43663 620 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 ZNF853P0CG23 659 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.21
NEDD9-202ENST00000379446 CXCL9Q07325 125 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 CCDC73Q6ZRK6 1079 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 GPC2Q8N158 579 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 ERMNQ8TAM6 284 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 FAM161BQ96MY7 647 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 KRT23Q9C075 422 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 TSPY26PQ9H489 355 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 NRXN1Q9ULB1 1477 aa7.46□□□□□ -1.21
NEDD9-202ENST00000379446 USP42Q9H9J4 1324 aaKnown RBP7.46□□□□□ -1.21
NEDD9-202ENST00000379446 ADM5C9JUS6 153 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 MBD3O95983 291 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 SSR1P43307 286 aaKnown RBP7.46□□□□□ -1.22
NEDD9-202ENST00000379446 PSMC4P43686 418 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 SMAP1Q8IYB5 467 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-202ENST00000379446 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 RBSNQ9H1K0 784 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 MTUS1Q9ULD2 1270 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 ATP6V0A2Q9Y487 856 aa7.46□□□□□ -1.22
NEDD9-202ENST00000379446 SETBP1Q9Y6X0 1596 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms